Desulfoglaeba alkanexedens: FDQ92_13080
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Entry
FDQ92_13080 CDS
T05964
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dax
Desulfoglaeba alkanexedens
Pathway
dax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FDQ92_13080 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dax01007
]
FDQ92_13080 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dax03016
]
FDQ92_13080 (lysS)
Enzymes [BR:
dax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FDQ92_13080 (lysS)
Amino acid related enzymes [BR:
dax01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FDQ92_13080 (lysS)
Transfer RNA biogenesis [BR:
dax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FDQ92_13080 (lysS)
Prokaryotic type
Other AARSs
FDQ92_13080 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCQ23021
UniProt:
A0A4V1ERW1
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All DBs
Position
complement(2889476..2890978)
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AA seq
500 aa
AA seq
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MDDLNLVMRERLRKAEELEQSGWALFPNGLAVSDHIGDILRDHGSKSAEELEDQAPEFTV
AGRVMAIRSFGKSTFMHILDAQGRIQLYFQRNELGEERYDFAKKLDIGDIIRVRGRLFKT
RTGELTLFVHAFDLLTKNLRPLPEKYHGLKDVETRYRQRYVDLIVNESVRETFVKRSAII
QAVREFLCERGFLEVETPMMQAIPGGATAKPFKTYHNALGMELYLRIAPELYLKRLLVGG
FERVFELNRNFRNEGISTQHNPEFTMLEFYQAYATYEDLMTLTEELFAHVAHRVNGGSLQ
LTYQNQLIDLTPPWRRYRLYEALTQLGNVPEEAIEDFEAALRFSRAHGIQAEKYEGHGKL
LTKLFDVLVEPLLVQPTFITHYPLEVSPLSRRNEVEPDLTDRFELFIAGREMANAFSELN
DPRDQRARFQRQLASREAGDEEAHLMDEDYIRALEYGMPPAAGEGIGIDRLVMLFTDAPS
IRDVILFPLLRSEKKTQTPL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcaacctggtgatgcgcgagcggcttcgaaaagcggaagaactggagcaa
agcggttgggctcttttccccaacggcctcgcggtgtcggatcacatcggcgacatcctg
cgcgaccatggatcgaaaagcgccgaggagctggaggaccaggctccagagttcacagtg
gccggccgcgtgatggcgatccggtccttcggtaagtccacgttcatgcacattctggac
gcccagggccgcatccagctctattttcagcgaaacgaactgggggaagagcgatacgat
ttcgccaagaagctcgacatcggagacatcattcgggtacgggggcggctgttcaagacg
cgcaccggcgaactcacgctcttcgtccacgccttcgacctcctcaccaagaaccttcgc
ccgcttcccgaaaaataccacggcctgaaagacgtcgaaacccgataccgccagcgctat
gtggacctcatcgtgaacgaatccgtccgggagacgttcgtcaagcgaagcgccatcatt
caggcggtccgggagtttctttgcgagcgcgggttcctggaagtggaaacgcccatgatg
caggccatcccggggggagccacggcgaagccgttcaagacgtaccacaacgccctgggc
atggagctttatcttcggatcgccccggagctctacctgaaacggctgctggtgggcgga
ttcgagcgggtcttcgagctgaaccggaatttcagaaacgaaggcatttccacccagcac
aatcccgagttcaccatgctggaattctaccaggcttacgccacctatgaagacctgatg
acgctcactgaggagctgttcgcccacgtggctcatcgggtaaacggtgggagcctccag
ctgacttaccagaaccagctcatcgacctcacacctccctggcggcgctaccggctctac
gaagccctgacgcagctcggaaacgtccccgaggaggccatcgaagacttcgaggcggcg
ctccgtttttcccgcgctcacgggattcaggcggaaaagtacgagggacacgggaagctg
ctcaccaagcttttcgacgtcctggtggaaccgcttctggttcagcccaccttcatcacc
cactaccccttggaagtttccccgctttccaggagaaacgaggtggagccggatctcacg
gaccgtttcgaactgttcatcgccgggcgggagatggccaacgcgttttccgaactgaac
gatccgcgggatcagagggctcggtttcagcggcagctggcgtcccgcgaggccggggac
gaagaggcgcacctcatggacgaggattacatccgggccctcgaatacggcatgcccccg
gccgccggcgaggggatcggcatcgaccgcctggtgatgctcttcaccgatgcaccgagc
atccgggacgtgatcctctttccactcctgagatcggagaaaaagacccagacgcctcta
tga
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