Dermacoccus abyssi: FV141_01030
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Entry
FV141_01030 CDS
T06197
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
day
Dermacoccus abyssi
Pathway
day00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FV141_01030 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
day01007
]
FV141_01030 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
day03016
]
FV141_01030 (serS)
Enzymes [BR:
day01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FV141_01030 (serS)
Amino acid related enzymes [BR:
day01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FV141_01030 (serS)
Transfer RNA biogenesis [BR:
day03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FV141_01030 (serS)
Prokaryotic type
FV141_01030 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
OVT1
DUF4315
SOGA
DUF4337
Motif
Other DBs
NCBI-ProteinID:
QEH92278
LinkDB
All DBs
Position
203297..204613
Genome browser
AA seq
438 aa
AA seq
DB search
MIDIKLLRENPDAVRASQRARGADESVVDQILELDATRRSSLGEFEKVRAEQKQVSKSVG
AAMGALNKAKKSGDDAEVARLQADADKAREDATALSTRVKELEATADEAGAKFDELMRTV
PNVVLDGVPAGGEDDFVTVKTVGEPLQFDFEPKDHLEIGEKIGAIDMERGTKVSGSRFYF
LKGVGARLELALLQMALDQAIANDFTPMITPTLVRPETMQGTGFDVKHDAEIYRVQEEDD
LYLVGTSEVALAGYHMNEIIDVAAPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEM
FTYCKVEDAEAEHAKMLAWEEEMLAKCELSYRVIDTAAGDLGTSAARKFDCEAWVPTQGT
YRELTSTSNCTTFQARRLNIRERTDGATRSVATLNGTLATTRWLVAILETHQQADGSVRV
PEALRKYMGGLEVLPVIA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacatcaagcttctgcgcgaaaaccctgacgccgtccgcgcgagccagcgtgct
cgcggcgccgacgagagcgtcgtcgaccagattctcgaactcgacgcgacgcgtcgttcg
tcgctcggcgagttcgagaaggtgcgtgccgagcagaagcaggtctccaagagcgtcggt
gccgcaatgggcgcgctcaacaaggcgaagaagtccggtgacgacgcggaggtcgcgcgc
ctccaggccgacgcggacaaggcccgagaggacgccaccgcactcagcacccgcgtcaag
gaactggaggccaccgccgacgaggccggcgccaagttcgacgagctcatgcgtaccgtc
cccaacgtcgtcctcgacggcgtacccgccggcggcgaggacgatttcgtcaccgtcaag
acggtcggcgagccgcttcagttcgacttcgagccgaaggaccacctcgagatcggcgag
aagatcggcgccatcgacatggagcgcggcacgaaggtgtcgggctcgcgcttctacttc
ctcaagggcgtcggcgcgcgcctcgagctggcgctgctgcagatggcactcgaccaggcc
atcgccaacgacttcacgcccatgatcacgccgacgctcgtgcgccccgagaccatgcag
ggcaccggcttcgacgtcaagcacgacgccgagatctaccgcgtgcaggaggaggacgac
ctctacctcgtcggcacctccgaggtggccctcgccgggtaccacatgaacgagatcatc
gacgtcgccgcgcccgtgcgctacgccggatggtcgagctgctaccgccgcgaggccggc
tcgtacggcaaggacacgcgcggcatcattcgcgtgcaccagttcaacaaggtcgagatg
ttcacgtactgcaaggtcgaggacgccgaggccgagcacgccaagatgctcgcctgggaa
gaggagatgctcgccaagtgcgaactctcctaccgcgtcatcgacacggccgccggcgac
ctcggcacgagcgccgcgcgcaagttcgactgcgaggcctgggttcccacgcagggcacc
taccgcgagctgacgtcgacgtcgaactgcacgaccttccaggcgcgccgcctcaacatc
cgtgagcgtaccgacggcgccacccgctccgtcgccaccctcaacggcacgctcgcgacg
acgcgctggctcgtcgccatcctcgagacgcaccagcaggccgacggctccgtccgcgtt
cccgaggctctgcgcaagtacatgggtggccttgaggtgctgccggtcatcgcctga
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