Dermacoccus abyssi: FV141_02900
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Entry
FV141_02900 CDS
T06197
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
day
Dermacoccus abyssi
Pathway
day03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FV141_02900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_02900
Enzymes [BR:
day01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FV141_02900
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FV141_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
PhoH
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
TraI_hel_assoc_N
AAA
DEAD
AAA_16
Flavi_DEAD
SLFN-g3_helicase
Wza_C
Motif
Other DBs
NCBI-ProteinID:
QEH92604
LinkDB
All DBs
Position
complement(603032..604843)
Genome browser
AA seq
603 aa
AA seq
DB search
MTDTQLPTTPGERSAEPGGDPPNGTPLETFRAAAFVTEGDALVASRVARLVDAPTDTWQI
TTLALTVRAVREGSSALALDEIGRLTPERDRSLDDDTEAPTITLADIVAPPSSHQLADDL
RAGPLVEQGVVHLEYGLAYLDRYYRDEVIVAGLLRSRGVAPVDDDALRRAGAALEGRALD
DAQRAAVHSALTSATTVLTGGPGMGKTYTVAAVLVAARAALGDTTRIALAAPTGKAAARM
AESLREADVLADNDALTLHRLLGYDRTNSQRFVHGRGNPLPHDVVVVDEASMISLSLMAR
LLEALGPNTRLVLVGDPDQLASVEAGSVLGDLVAGLDTGVIRLATHHRLTQGRAAVAEAF
AQPTGDHPDGGEGTVPPSSERVLAAVDSPDDGVEFLETDAPDLTMLPHLVEAASRLREVA
ATGNAEAAVAQLRASRLLAAHRTGPFGVARWNRLIENALAERFPDVTPYAMYVGRPVIVT
KNDRALGLFNGDSGVIIRQGTALVAAMETASGVRTFSPWRLGDLETMHAMTVHKAQGSQA
EHVTVIVPPVGSRLLTREMLYTALTRATERLTVVGTREAVELAVETPILRASGLRHRLRE
QDG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgcagctgccgaccacacccggcgagcgttccgcagagccgggcggcgac
ccaccgaacggcactccgctcgagacgttcagggcggcggcgttcgtcaccgagggcgat
gcccttgtcgcgagccgcgtcgcccggctcgttgacgcgccgaccgacacgtggcagatc
accacgctcgcgctgaccgtgcgcgccgtgcgcgagggctccagcgcgctcgcactcgac
gaaatcggccgcctcacacccgaacgggaccgttcgctcgacgacgacaccgaggcaccg
accatcacgctcgccgacatcgtcgcgccaccgtcgtcgcaccagctggcagacgacctg
cgcgccggtcccctcgtcgagcagggtgtcgtgcacctcgagtacggcttggcgtacctc
gatcgctactaccgcgacgaggtgatcgtcgccggtctcctgcgctcacgcggtgttgcg
cccgtcgacgacgacgctctccggcgcgcaggtgcggccctcgaagggcgcgccctcgac
gacgcccaacgcgccgcagtgcactcggcactcacgtccgcaacgacagtcctcaccggt
ggtcccggcatgggtaagacctacacggtcgctgcggtgctcgtggccgcccgagcagcc
ctcggcgacacgacacgcatcgcactcgctgcccccacgggcaaggccgcggcacgcatg
gccgaatcgctgcgcgaagcggacgtgctcgccgacaacgacgcgctcacgctccaccgg
ttgctcggctacgaccgcaccaactcccaacggttcgtccacggtcggggcaatccgctc
ccgcacgatgtcgtcgtcgtggacgaggcgtcgatgatctcgctcagcctcatggcacgc
ctgctcgaagcgctcgggccgaacacacgcctcgtgctcgtcggcgacccggaccagctc
gcgagcgtcgaggcgggttccgtgctcggcgacctcgtcgccgggctcgacaccggagtg
atccggctcgccacgcaccaccgcctcacgcagggtcgcgcagcggtggcggaggccttc
gcgcagccgaccggcgaccatcccgacggcggcgaaggaactgtcccgccgtcctcggag
cgtgtgctcgcagccgtcgacagcccggacgacggcgtcgagttcctcgagaccgacgcc
cccgacctcacgatgttgcctcacctcgtcgaggccgcttcccggctgcgcgaggtcgcg
gccacgggcaacgcagaggcggctgtcgcgcagcttcgcgcaagtcggctcctcgcggcg
caccgcaccgggccgttcggtgtggcgcggtggaaccgtctcatcgagaacgccctcgcc
gagcggttccccgacgtcacgccgtacgccatgtacgtggggcgcccggtcatcgtgacg
aagaacgaccgcgccctcgggctcttcaacggcgacagcggcgtcatcatccgccagggc
accgcgctcgtggccgcgatggaaaccgcctccggcgtgcgcacgttctcgccgtggcgc
ctgggcgacctcgagacgatgcacgccatgaccgtgcacaaggcccagggaagccaggcc
gagcacgtcaccgtcatcgtgccgccggtcggctcgcgcctgctcacccgcgagatgctc
tacacggctctcacccgagcgacagagcgcctcaccgtcgtcggcacgcgtgaggccgtc
gaactcgctgtggagacgccgatcctgcgcgcctccgggctgcgtcaccgtctgcgcgag
caggacggctga
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