Dermacoccus abyssi: FV141_03335
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Entry
FV141_03335 CDS
T06197
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
day
Dermacoccus abyssi
Pathway
day03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FV141_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
day03021
]
FV141_03335
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_03335
Enzymes [BR:
day01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FV141_03335
Transcription machinery [BR:
day03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FV141_03335
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FV141_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QEH92679
LinkDB
All DBs
Position
689150..690169
Genome browser
AA seq
339 aa
AA seq
DB search
MLIAQRPTLSEEVVSESRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSLRIDGVQ
HEFSTIPGVKEDVTEVILNIKGLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLEIATLNDKGNIEMELTVERGRGYVSAALNKSAEQEIGRIPVDSIYSPVLAVTYKVEA
TRVEQRTDFDKLIVDVETKNSMAPRDAMASAGSTLVELFGLARELNVEAEGIDMGPSPTD
AALAADLALPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGSKSIHEVADK
LRDMGLQLKDSPPGFDASVIADRYDEDADGADLAEDEQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccaccctgtcggaggaagttgtctccgagagccgttcgcgg
ttcgtcatcgagcccctggagccgggcttcggctacacgctcggcaactccctgcgtcgc
accctgctctcgagcatccccggtgccgccgtcaccagccttcgcatcgacggtgtgcag
cacgagttctcgacgatcccgggcgtcaaggaagacgtcaccgaggtcatcctcaacatc
aagggtctggtcgtctcctcggagcacgacgagcccgtggtgatgtacctgcgcaagcag
ggccccggagtggtcaccgccgctgacatcgcgcccccggccggtgtcgaagtgcacaac
ccggacctcgagatcgccacgctcaacgacaagggcaacatcgagatggagctgacggtc
gagcgcggccgcggttacgtctcggcagcgctgaacaagtcggcggagcaggagatcggc
cgcatcccggtcgactccatctactcgcccgtgctggccgtgacctacaaggtcgaggcc
acgcgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagacgaagaac
tcgatggctccgcgtgacgccatggcttcggccggttcgacgctcgtcgagctgttcggc
ctggcccgtgagctcaacgtcgaggccgagggcatcgacatgggcccgtcgccgaccgac
gccgcgctcgccgcggacctggctctgccgatcgaggacctcgacctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgaactcgtgtcccgcagcgag
gccgacctgctcgacattcgtaacttcggttcgaagtcgatccacgaggtcgccgacaag
ctccgtgacatgggcctccagctgaaggacagcccgcccgggttcgacgccagcgtcatc
gccgaccgctacgacgaggacgccgacggcgcggacctcgccgaggacgagcagtactga
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