Dermacoccus abyssi: FV141_03920
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Entry
FV141_03920 CDS
T06197
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
day
Dermacoccus abyssi
Pathway
day03420
Nucleotide excision repair
day03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FV141_03920
03430 Mismatch repair
FV141_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_03920
Enzymes [BR:
day01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FV141_03920
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FV141_03920
MMR (mismatch excision repair)
Other MMR factors
FV141_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
QEH94593
LinkDB
All DBs
Position
808831..810951
Genome browser
AA seq
706 aa
AA seq
DB search
MDADAVLEGLDPGQLEVAANPLGPMVVLAGAGTGKTRAITHRIAYGVHSGALVGQRTLAV
TFTARAAGEMRTRLRDLGVPQVVARTFHSAALKQLQYFWPQAIGGGAPEVIKTKGSIVGE
AAGRLRLQMDRTALRDVASEIEWAKVSMLTPETYPVAARRAGRQPADLDLTAMARLLDAY
EDVKSARNVIDFEDVLLLMTGILAEREDIARTVRDQYRHFIVDEYQDVNAVQQHLLSLWL
GERKDLCVVGDPAQTIYSFTGASPSHLRTFASKFEGAKRVELVRNYRSTPQIVTLANEVM
KKADRAFGSVTLQAQRGSGTTPRLVTYPDDAAEARGVVEDIRTLLKAGEKPSTIAILFRT
NAQSEAFETALADADVPYQIRGGERYFNREEVRRGILLLRGAARSDDGSKPLPDTVADVL
MGAGWSPHPPAAGATRERWESLQSLVELSKDVARTVPGAQVRQFVAELDRRAAEQHAPKV
EGITLASLHSAKGLEWDSVFFAGASDGLLPIMMATTPEAIEEERRLMYVGITRARKNLSL
SFALARHEGGRATRSPSRFLDGTGSVLEGAAAARRPGARSTRTSKPVKAAKCRTCGRDLD
TAAERKIGRCSECPATYDEGQFEALKTWRRGAAQRDKVPAFVIFTDATLVAIAETRPTTP
AGLRAISGVGTSKVTKYGASVLAVLAGADPEAEVESPSAFGEFDPA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgacgcggtgctcgaagggctcgacccggggcagctcgaggtggccgcgaac
ccgctcggccccatggtcgtgctcgcgggtgcgggcaccggcaagacccgcgccatcaca
caccgcatcgcctacggtgtccactccggtgcgctcgtcggccagcgcaccctggcggtc
acgttcacggcccgcgcggccggtgagatgcgcacgcgactgcgcgatctcggcgtcccg
caggtcgtggcccgcacctttcactcggcggcactcaagcaactgcagtacttctggccc
caggccatcggtggaggagcccccgaggtgatcaagacgaagggcagcatcgtcggcgag
gcggccgggcgcctgcgcctgcagatggaccgcactgcactgcgtgacgtggcctccgag
atcgagtgggccaaggtctcgatgctcaccccggagacctaccccgtcgcggctcgacga
gccggccgtcagccggccgacctcgacctgacggccatggcgcggctcctcgacgcgtac
gaggacgtgaagtccgcgcgcaacgtcatcgacttcgaggacgtgctgctgctcatgacc
ggcatcctcgccgagcgcgaggacatcgcccgcaccgtgcgcgatcagtatcgccacttc
atcgtcgacgagtaccaggacgtcaacgccgtccagcagcacctgctgtcgctgtggctc
ggcgagcgcaaggacctgtgcgtcgtgggcgacccggcccagacgatctactcgttcacc
ggcgcatcgcccagtcatctgcgcacgttcgcgtcgaagttcgagggcgcgaagcgcgtc
gaactcgtgcgcaactatcgctcgacgccgcagatcgtcacgctcgccaacgaggtgatg
aagaaggccgaccgcgcgttcggcagcgtgacgctccaggcccagcgcgggtccggcacg
acgccgcgcctcgtcacctaccccgacgatgcggccgaggcgcgcggcgtcgtggaggac
atccgcaccctcctcaaggcaggggagaagccgagcaccatcgccatcctcttccgcacc
aacgcccagtccgaggccttcgagacggcgctcgcggatgccgacgtgccgtaccagatc
cgcgggggcgagcggtacttcaaccgtgaggaggtccgtcggggcatcctcctgctgcgc
ggtgcagcgcgtagcgacgacggctccaagcccctgcccgacaccgtcgccgacgtcctc
atgggcgccgggtggtcgccacatccgccagctgccggggccacccgcgagcggtgggaa
tcgctgcagtcgctcgtggaactgagcaaggacgtcgcgcgcaccgtgcccggcgcccag
gtgcgtcagttcgtcgccgaactcgaccgccgggccgcggaacaacacgcaccgaaggtc
gagggcatcacgctcgcctccctgcactcggccaaggggctggagtgggattcggtcttc
ttcgccggtgcgagcgacgggctgctgccgatcatgatggccacgacacccgaggcgatc
gaggaggaacgacgcctcatgtacgtcggcatcacgcgagcacgcaagaacctctccctg
agcttcgcgctggcccgtcacgagggcggacgggccacccgctcgccgtcccgtttcctc
gacggcaccggttcggtactggaaggagcggccgctgcgcgccgtccgggcgctcgcagc
acccggacgagcaagcccgtcaaggcggcgaagtgccgcacctgtggccgcgatctcgac
acggccgccgagcgcaagatcgggcgctgctccgaatgcccggccacctacgatgagggg
cagttcgaggccctcaagacgtggcgacgtggcgccgcgcagcgcgacaaggtgccggcc
ttcgtcatcttcaccgatgcgacgctcgtcgccatcgccgagacgcgtccgacgacgccg
gcggggctgcgtgccatctccggtgtgggcacctcgaaggtgacgaaatacggcgcgtcc
gtgctcgcagtcctcgccggcgccgacccggaggcagaggtcgaatcgccgagcgccttc
ggagagttcgacccggcctga
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