Dermacoccus abyssi: FV141_04120
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Entry
FV141_04120 CDS
T06197
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
day
Dermacoccus abyssi
Pathway
day00300
Lysine biosynthesis
day00470
D-Amino acid metabolism
day01100
Metabolic pathways
day01110
Biosynthesis of secondary metabolites
day01120
Microbial metabolism in diverse environments
day01230
Biosynthesis of amino acids
Module
day_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
day00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FV141_04120 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FV141_04120 (lysA)
Enzymes [BR:
day01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FV141_04120 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEH92803
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Position
852160..853527
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AA seq
455 aa
AA seq
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MSSVPNAPTGPLEEIVWPRTARRGDDGVISIAGIAATELADRFGTPAYVIDEDDVRRRAR
AYREAFSQAFGDIGTVADVYYAGKAFLTSHIARWVVEEGLRLDVCSGGELAIARKAEVPG
EAIGMHGNNKSVEEIDAALAYGVGRIVVDSFEEIERVAAAAAKHDLRAPVMLRVKLGVEA
HTHEFIATAHEDQKFGFSLADGQVADAVGRVLAHPELELLGFHSHIGSQIFESDGFEEAA
TRLVALQLDVARTHGVELPELDLGGGFGIAYLPSDTPLEPADMAQQLARIVKTACDDAGV
AVPRVSIEPGRSIIGPGGVTLYRVGTVKPVQATDDLVRSYVSVDGGMSDNARPALYAADY
HAALANRGGADDLVPTRIVGKHCESGDIVVRDINFPADVADGDLVAVAATGAYCRALASQ
YNHVPRPPVVAVKDGDARVLLRRETIDDLFALEEE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccgtaccgaacgcgccgaccggccccctcgaggagatcgtctggccacgcacg
gcccgccgcggggatgacggcgtcatcagcatcgccggtattgccgccaccgaactggcc
gatcgcttcggcacccccgcctacgtcatcgacgaggacgacgtgcgccggcgcgcccgc
gcctaccgcgaggcgttctcgcaggcgttcggcgacatcggcacggtggccgacgtctac
tacgcgggcaaggcgttcctcacgtcgcacatcgcgcgctgggtcgtcgaggagggcctg
cgtctcgacgtctgctccggcggcgaactcgccatcgcccgtaaggccgaggtgcccggt
gaggccatcggcatgcacggcaacaacaagagcgtcgaggagatcgacgcggcgctcgcg
tacggcgtggggcgcatcgtcgtcgactcgttcgaggagatcgaacgcgtcgccgcggca
gccgccaagcacgacctgcgcgcgcccgtcatgctgcgcgtcaagctcggcgtcgaggcc
cacacccacgagttcatcgcgacggcccacgaggaccagaagttcggtttctccctcgcg
gacggtcaggtcgccgacgccgtgggccgggtgctcgcccaccccgagctcgaactgctc
ggcttccacagccacatcggctcgcagatcttcgaatcggacgggttcgaggaggccgcg
acgcgcctcgtcgccctccagctcgacgtcgcgcgaacgcacggcgtcgagttgcccgaa
ctcgacctcggcggagggttcggcatcgcctacctgcccagcgacaccccgctcgagccg
gcggatatggcgcagcagctcgcgcgcatcgtcaagacggcctgcgacgacgccggtgtc
gccgttccgcgcgtctcgatcgagccgggccgcagcatcatcggccccggcggcgtgacg
ctctaccgggtcggcacggtcaagcccgtgcaggccacggacgacctcgtgcgttcctac
gtcagcgtcgacggcggcatgagcgacaacgcccgccccgctctctacgccgctgactac
cacgcggcgctcgcgaaccgcggtggcgcggacgacctcgtgcccacccgcatcgtcggc
aagcactgcgagagcggcgacatcgtcgtgcgcgacatcaacttccccgccgacgtcgcg
gacggtgacctcgtcgccgtcgccgcgaccggcgcctactgccgcgcgctcgcgtcgcag
tacaaccacgtcccgcgcccgcccgtcgtcgccgtcaaagacggcgacgcgcgcgtcctg
ctgcgccgggagaccatcgacgacctgttcgccctggaagaggaatga
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