Dermacoccus abyssi: FV141_04955
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Entry
FV141_04955 CDS
T06197
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
day03009
]
FV141_04955 (rimO)
Enzymes [BR:
day01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FV141_04955 (rimO)
Ribosome biogenesis [BR:
day03009
]
Prokaryotic type
ribosomal protein modification factors
FV141_04955 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEH92944
UniProt:
A0ABX5Z826
LinkDB
All DBs
Position
1029271..1030740
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AA seq
489 aa
AA seq
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MTSAPSRSVAVVTLGCARNEVDSEELAGRLSAEGWTLVDDAAQADVAVVNTCGFVEQAKK
DSIDALLEANDLKDSGRTQAVVAVGCLAERYGNQLAEQLPEADAVLGFDSYSDMSSHLTA
VLNGHKPEAHTPGDRRKLLPISPAKRQEGASGLALPGHGDAPTLEPSDVEVASPVSTPRV
IRARLDGRPWAPLKIASGCDRRCAFCAIPAFRGAFLSRRPSDVLAEARWLAEHDVKEVFL
VSENSTSYGKDLGDLRLLDTMLPELTAIDGIERVRVSYLQPAEIRPDLLDVMANTPGVAP
YYDISFQHASGPLLRTMRRFGDRESFLTLLDDVRRRTPNAGIRSNVIVGFPGETEKDLEE
LEQFLVAARLDVVGVFGYSDEDGTEAESYADKLPTDEIEARLEHFRTLTEELNLQRAEER
VGERLDVLIEAEEDEDGELRFVGRAGQQGPDVDGVTYVETSDERPLATGDMVSVEVVATE
GIDLVAEVR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgccccctcacgaagcgtcgccgtcgtcaccctcgggtgcgcgcgcaacgag
gtcgactccgaggaactggccggtcgcctctcggccgagggctggaccctcgtcgacgac
gccgctcaggccgacgtcgccgtcgtgaacacgtgtggcttcgtcgagcaggcgaagaag
gactccatcgacgctctcctcgaggcgaacgacctcaaggattcgggccgcacgcaggcc
gtcgtcgccgtcggctgcctcgccgagcgttacggcaaccagctcgcggagcagcttccc
gaggcggacgccgtgctcggcttcgactcctactccgacatgagctcccacctcactgcc
gtgctcaacggccacaagccggaggcccacacgccaggggaccgtcgtaagttactgccg
atctcgccggccaagcgtcaggagggagcctccggcctcgcgctgcccggccacggcgac
gctccgacgctcgagccctccgacgtggaagtcgcctcgcccgtcagtacgccgcgcgtc
atccgcgcccgcctcgacggccgcccgtgggccccgctcaaaatcgcgagcggttgcgac
cgacggtgcgcgttctgcgccatcccggccttccgcggcgcgttcctgtcccgccgtccc
tccgacgttctcgccgaagcgcgttggctcgcggagcacgatgtcaaggaggtcttcctc
gtctcggagaactcgacgtcgtacggcaaggacctcggcgacctgcgtctgctcgacacc
atgcttcccgaactcaccgccatcgacggcatcgagcgtgtgcgtgtgtcgtacctgcag
cctgcggagatccgacccgacctgctcgacgtcatggcgaacacgcccggcgtcgcgccg
tactacgacatctccttccagcacgcctccgggccgctcctgcgcacgatgcgccgcttc
ggtgaccgcgagtcgttcctcacgctcctcgacgacgtgcgccgccgcacgccgaacgcc
ggcatccgctcgaacgtcatcgtcggcttccccggcgagaccgagaaggatctcgaggaa
ctcgagcagttcctcgtcgccgcgcgtctcgacgtcgtcggtgtcttcggttactccgac
gaggacggcaccgaggccgagagctacgcggacaagctacccacggacgagatcgaagcc
cgcctcgagcacttccgtacgctcaccgaggaactcaacctccagcgagccgaggagcgc
gtcggagaacgcctcgacgtcctcatcgaggcggaggaggacgaggacggcgaactgcgc
ttcgtcggccgcgccggacagcagggccccgacgtcgacggcgtcacctacgtcgagacg
agcgacgagcgccccctcgccaccggcgacatggtgagcgtcgaggtcgtcgccaccgaa
ggcatcgacctcgtcgccgaggtgcggtga
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