Dermacoccus abyssi: FV141_05625
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Entry
FV141_05625 CDS
T06197
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
day03032
]
FV141_05625
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_05625
Enzymes [BR:
day01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FV141_05625
DNA replication proteins [BR:
day03032
]
Prokaryotic type
DNA Topoisomerases
FV141_05625
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FV141_05625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ZT_dimer
Inp1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QEH93068
LinkDB
All DBs
Position
complement(1186313..1188868)
Genome browser
AA seq
851 aa
AA seq
DB search
MARSKKPEVLDDDFVENIIDIDVEEEMRSAFLEYSYSVIYSRALPDARDGLKPVQRRILF
SMDELGLMPTKNHVKSSRVVGEVMGKYHPHGDLAIYDTLVRMAQDFTMRLPLVDGHGNFG
SLDQGPAASRYTEARLAPAALTLTESLDENTVDFVPNYDDSLQQPSVLPAAFPNLLVNGA
SGIAVGMATNMPPHNLGEVVQAAVHLIKNPDCSLDDLMRFIPGPDLPMGGRIVGLEGVRD
AYLSGRGSFRTRATCSIENVTPRKKGIVVTELPYMVGPEKVIDRMRDLVSSKKLQGISDV
KDLSDRHHGLRLVIELKNGFNPDAVLEQLYKLTPMEESFGINNVALVDGQPRTLGLKDLL
RVYTDFRIDVVRRRTAYRLGKKEDRLHLVDGLLIAILDIDEVIQIIRSSDDSGIARERLM
KVFDLSEAQASYILDLQLRRLTKFSRLELEKEAEELRKEIEKLRAILADVKLLHKVVCDE
LLAIAKEYGTPRRTVLLEASGETKTAKSATPLEIADDPCWVLLSSTGLVARTTNADPLGT
DGNRRKHDAIVAAARTSARGEFGVVTSTGRLFRVSALELPHLVDTHEAPVLDGGAPLAAF
VDLAPGEKVLTVTSLRADSPGLALGTAAGVVKRVNPDYANKPIMEVITLKADDVVVGAVE
LQTGTEELVFVTNEAQLLHFNADGVRPQGRTGGGVAGIKLGKGAHVIHFGSVSRDGVVVT
GAGHPSSPDGEITSLKVAPFAEFPAKGRATAGVRAHRFLRGENHLTFAWVGSAPARAADA
TGKAITLPPADGKRDGSGDTAPGQIAAIGTTAPYTDVSADASASEVAEQTPVSAAEESAE
GTLSLFDGDDA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgttcgaagaagcccgaggttctcgacgacgacttcgtcgagaacatcatcgac
atcgatgtcgaagaggagatgcgctcggcgttcctcgagtactcctactccgtcatctac
tcgcgcgccctgcccgacgcacgcgacggcctcaagccggtacagcgccgcatcctgttc
tccatggacgagctcggcctcatgccgacgaagaaccacgtcaagtcctcccgcgtcgtc
ggcgaggtcatgggtaagtaccacccgcacggcgacttggccatctacgacaccctcgtg
cgcatggcgcaggacttcacgatgcgcctgccgctcgtcgacggccacggcaacttcggt
tccctcgaccagggccccgccgcgtcccgttacaccgaggcccgcctcgcgccggccgcc
ctgacgctcaccgagagcctcgacgagaacaccgtcgacttcgtccccaactacgacgac
tccctgcagcagccctccgtcctgccggccgccttccccaacctgctcgtcaacggcgcc
agcggcatcgccgtcggcatggccaccaacatgccgccgcacaacctcggcgaagtcgtc
caggccgccgtccacctcatcaagaaccccgactgcagcctcgacgacctcatgcgcttc
atccccggccccgacctgcccatgggcgggcgcatcgtcggcctcgagggcgtgcgcgac
gcgtacctttccggccgcggctccttccgcacccgcgccacctgcagcatcgagaacgtc
accccccgcaagaagggcatcgtcgtcacggaactgccctacatggtcggccccgaaaag
gtcatcgaccgcatgcgcgacctcgtgagcagcaagaaactgcagggcatctccgacgtc
aaggacctctcggaccgccaccacggcctgcgcctcgtcatcgaactcaagaacggcttc
aaccccgacgccgtgctcgaacagctctacaagctcacgccgatggaggaatccttcggt
atcaacaacgtcgcgctcgtcgacggccagccgcgcaccctcggcctcaaggacctcctg
cgcgtctacaccgacttccgcatcgacgtcgtgcgccgccgtaccgcctaccgcctcggc
aagaaggaagaccgcctccacctcgtcgacggtctgctcatcgcgatcctcgacatcgac
gaggtcatccagatcatccgctcgtccgacgactcaggtatcgcgcgcgaacgcctcatg
aaggtgttcgacctctccgaggcgcaggccagctacatcctcgacctgcagctgcgccgc
ctgacgaagttctcccgcctcgagctggagaaggaagccgaagagctgcgcaaggagatc
gaaaagctgcgcgcgatcctcgccgacgtcaagctcctgcacaaggtcgtctgcgacgaa
ctgctcgccatcgcaaaggagtacggcacgccgcgccgcaccgtgctgctcgaggcctcc
ggcgaaacgaagaccgccaagagcgccaccccgctcgagatcgccgacgacccgtgctgg
gtgctcctctcctccaccggcctcgtcgcacggacgacgaacgcggacccgctcggaacc
gacggcaaccgccgtaagcacgacgccatcgtcgccgccgcgcgcacgagcgcgcgcggt
gagttcggcgtcgtcacctccaccggacgactcttccgcgtctccgcgctcgaactgccg
cacctcgtcgacacccacgaagcacccgtgctcgacggcggcgccccgctcgccgcgttc
gtcgacctcgcccccggcgagaaggtgctcaccgtgacctcgctgcgcgccgactccccc
ggcctcgcgctcggcacggccgccggcgtcgtcaagcgcgtcaacccggactacgcgaac
aaaccgatcatggaagtgatcacgctcaaggctgacgacgtcgtcgtcggcgccgtcgag
ctccagaccggcaccgaggaactcgtcttcgtcaccaacgaagcgcagctgctgcacttc
aacgccgacggcgtgcgcccccagggccgcaccggcggcggcgtcgccggcatcaagctc
ggcaagggcgcccacgtcatccacttcggcagcgtctcgcgcgacggcgtcgtcgtcacc
ggcgccggccacccgagctcgccggatggcgagatcacctcgctcaaggtcgcaccgttc
gccgagttcccggccaagggccgcgcgacggccggcgtgcgcgcgcaccgcttcctgcgc
ggcgagaaccacctgaccttcgcgtgggtcggctccgcgccggcgcgcgccgccgacgcg
acgggcaaggcgatcaccctgcccccggccgacggcaagcgcgacggctcgggcgacacc
gctcccgggcagatcgcggccatcggcacgaccgcgccgtacaccgacgtttcggccgac
gcgtcggcgagcgaagtggcggagcagacgcccgtcagcgcggccgaggagagcgccgag
ggcacgctgagcctgttcgacggcgacgacgcctga
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