Dermacoccus abyssi: FV141_06240
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Entry
FV141_06240 CDS
T06197
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
day03009
]
FV141_06240
Ribosome biogenesis [BR:
day03009
]
Prokaryotic type
GTPases
FV141_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
AAA_16
ABC_tran
AAA_33
SpoIVA_ATPase
NTPase_1
AAA_22
ATPase_2
NB-ARC
Mur_ligase
NOG1
Motif
Other DBs
NCBI-ProteinID:
QEH93166
LinkDB
All DBs
Position
1320816..1322279
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AA seq
487 aa
AA seq
DB search
MSDEQNFPGDESVEQALRVGLEDFDLSDEDRALLSGEGGDDEGFSEADLRPVVAVVGRPN
VGKSTLVNRILGRREAVVEDVPGVTRDRVAYDAEWVGRRFTLVDTGGWEVDATGIHLRVA
EQAEVAVELADAVMFVVDATVGATDTDEAVVKLLRRSKKPVVLVANKVDDNRTEADAAML
WSLGLGEPYPVSALHGRGTGDALDAIINELPDKSAVAGAYPRGGPRRVALLGRPNVGKSS
LLNKLAGSERVVVDNVAGTTRDPVDEYIELGDKTWRFVDTAGIRRRVHQTRGADFYASLR
TQTALEKAEVAVVLIDAEQSIAEQDVRVVQQVIDAGRALVVAYNKWDLLDEERRYYLEKE
IERELVQVPWAPRVNISAATGRHTDRLVPALEVALDSWDQRIPTGRLNAFLGEVVAAHPH
PVRGGKQPRILFATQASTRPPRFVIFASGFIEAGYRRFIERRLREEFGFDGTPIEISVRV
REKRKQR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagcagaacttcccaggcgacgagtccgtcgagcaggccctccgggtcggg
ctcgaggacttcgacctcagcgacgaggaccgcgccctcctcagcggcgagggcggtgac
gacgagggcttcagcgaggccgatctgcgccccgtcgtggccgttgtcggacgccccaac
gtcggcaagtcgactctcgtcaaccgcatcctcgggcgccgcgaggccgtcgtcgaggac
gttccgggcgtgacgcgtgaccgtgtggcctacgacgccgagtgggtcggacgccgcttc
acgctcgtcgacaccggcggctgggaggtcgacgccacgggtattcacttgcgcgtcgcc
gaacaggccgaggtcgccgtcgagctcgccgacgccgtgatgttcgtcgtcgatgcgact
gtcggtgccaccgacaccgacgaggccgtcgtcaagctgctgcgccgctcgaagaagcct
gtcgtgctcgtggccaacaaggtcgacgacaaccgcaccgaggcggacgccgcgatgctg
tggtcgctcggtctcggtgagccctacccggtctcggcccttcacgggcgcggcacgggt
gacgccctcgacgccatcatcaacgagcttccggacaagtcggccgtcgccggcgcctac
ccgcgtggtggcccccgtcgtgtcgcgctgctcggacgcccgaacgtcggcaagtcgtcg
ctgctcaacaagctcgcgggctccgagcgcgttgtcgtcgacaacgtcgcgggtacgacg
cgtgacccggtcgacgagtacatcgaactcggcgacaagacgtggcgcttcgtcgacacc
gccggtatccgccgccgcgtccaccagacccgcggcgccgacttttacgcgtccctgcgc
acgcagacggcgctggagaaggcggaggtcgccgtcgtcctcatcgacgcggagcagagc
atcgccgagcaggacgtgcgtgtcgtccagcaggtcatcgacgcgggccgcgccctcgtc
gtcgcgtacaacaagtgggatctgctcgacgaggaacgccgctactacctggagaaggag
atcgagcgcgagctcgtgcaggtgccgtgggcgccgcgcgtcaacatctccgccgccacg
gggcgtcacacggaccgtctcgtcccggcgctcgaggtagctctcgactcgtgggatcag
cgcatcccgacgggccgcctcaacgcgttcctcggcgaggtcgtggcggcccacccgcac
ccggtgcgtggtggtaagcagccgcgcatcctcttcgcgacgcaggcctcgacgcgcccg
ccgcgcttcgtcatcttcgcgagtggcttcatcgaggccggctaccgccgcttcatcgag
cgtcgcctgcgcgaggagttcggtttcgacggcacgcccatcgagatctcggtgcgcgtg
cgcgagaagcgcaagcagcgctga
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