Dermacoccus abyssi: FV141_06525
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Entry
FV141_06525 CDS
T06197
Name
(GenBank) pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
day03009
]
FV141_06525
03016 Transfer RNA biogenesis [BR:
day03016
]
FV141_06525
Enzymes [BR:
day01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FV141_06525
5.4.99.29 23S rRNA pseudouridine746 synthase
FV141_06525
Ribosome biogenesis [BR:
day03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FV141_06525
Transfer RNA biogenesis [BR:
day03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FV141_06525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QEH93214
LinkDB
All DBs
Position
1377691..1378650
Genome browser
AA seq
319 aa
AA seq
DB search
MPTHSPLPMRHGLRAAWVRTPDRDPANPMPWASMRDFLRHKLPAEVDVDAMLADGRFVDD
DGRPWNGDEIYRPHTFVHFHRDLRPEPELPFELDVLHVDERIVVVDKPHFMASIPRGRHV
TQSVVVKAREMLGLPELGPAHRLDRLTAGVLVLTTEQRWRAPYQRMFEARVPAKTYEALA
PLRDDLELPRRVESHIRKDHGTAQAYEVAGAAINAVTDVHLEERRVVTAEGDDDARARRV
GLYRLEPSTGRTHQLRVHMSGLGVPICGDPLYPRELAVDIDDYSTPLQLLARRLEFVDPV
DGRTRVFTSRRELVPGDAT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgcactccccgctgcccatgcgtcacgggctgcgggccgcgtgggtgcgcacg
ccggatcgcgaccccgcgaacccgatgccgtgggcatcgatgcgtgacttcctgcgccac
aagctgcccgcagaggtcgacgtcgacgcgatgctcgccgacgggcgtttcgtcgacgac
gacggacgcccctggaacggtgacgagatctaccgtccccacacgttcgtgcacttccac
cgtgacctgcggcccgagccggagcttccgttcgagctcgacgtcctgcatgtcgacgag
cggatcgtcgtggtcgacaagccgcacttcatggcctcgatcccccgtggtcgccacgtc
acgcaatcggtcgtcgtcaaggcgcgcgagatgctcggcctgcccgaactcgggccggcc
caccgcctcgaccggctgacggcgggggtactcgtcctcaccaccgaacagcgttggcgg
gctccctaccagcgcatgttcgaagcccgcgtcccggcgaagacgtacgaggcgcttgct
cccctgcgtgacgacctggaacttccgcgtcgcgtggaatcgcacatccgcaaggaccac
ggcactgcgcaggcgtacgaggtggcgggcgcggccatcaacgccgtcaccgacgtccac
ctcgaggagcggcgcgttgtcacggcggagggcgatgacgacgctcgcgcccgccgggtc
ggcctctaccggctcgagccgagcaccgggcgcacccaccaactgcgtgtccacatgagc
gggctcggtgtaccgatctgtggcgatccgctctatccacgcgagctcgccgtcgacatc
gatgactactccactcccctgcagctgttggcgcgacgcctcgagttcgtcgatcccgtc
gacgggcgcactcgcgtgttcacctcacgccgagaactcgtccctggggacgcgacctga
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