Dermacoccus abyssi: FV141_07050
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Entry
FV141_07050 CDS
T06197
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
day
Dermacoccus abyssi
Pathway
day03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FV141_07050 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_07050 (uvrA)
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FV141_07050 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FV141_07050 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
AAA_33
AAA_23
APS_kinase
AAA_25
DnaJ_CXXCXGXG
AAA_22
nSTAND3
NACHT
ATPase
Viral_helicase1
cobW
SLFN-g3_helicase
Septin
DUF3090
Motif
Other DBs
NCBI-ProteinID:
QEH94647
LinkDB
All DBs
Position
complement(1486000..1488999)
Genome browser
AA seq
999 aa
AA seq
DB search
MLVRGAREHNLKNVSIEIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQ
FLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYFRLLFARAGRPHCPVC
GEPVGSQTPQQIVDSIQELPERTRYQVLAPVVRARKGEYVDLFAELQTKGFSRARVDGEI
VSLTEPPVLEKQKKHTIDVVVDRLVAKGPDDTSGRQRLTDSVETALGLADGLVVVEKVVR
EGEEVEGPLERRYSEKLACPNDHPLSMDAIEPRSFSFNSPFGACPECTGLGTELQVDPDL
VVPDEEKTLRDGAILPWAQGSGAADYFIRVMKALGDEQGFDLDTPWRALPTRARTMLLEG
KNHKVHVRYRNRYGRERSYSTGFEGVIPFVKRRHSETESEWSRERYEGYMREVPCPVCKG
ARLKPESLAVTIGGKSIAEVCALPISESAYFLDGVDFDSRERQIAERVIKEIGARLGFLL
DVGLDYLSLDRPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETL
TRLRDLGNTLIVVEHDEDTIETADWIVDIGPGAGEHGGEVVYSGPVEGLVKEERSITGGY
LSGRLSIPVPPTRRGQDGRQVVVEGAREHTLKNVDVAFPLGNLVVVTGVSGSGKSTLVND
ILYTSLANELNGARQVAGRHKRVTGMQQLDKVVHVDQSPIGRTPRSNPATYTGVFDNIRK
LFAETQEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARYNR
ETLEVHFKGKTIAEVLDMPIEEAADFFEAVPAIARHMRTLVDVGLGYVRLGQPAPTLSGG
EAQRVKLASELQKRSAGRTIYVLDEPTTGLHFEDIRKLLDVIQGLADKGNTVVVIEHNLD
VIKCADWVIDMGPEGGFRGGTVVAEGTPEQIAQVAESHTGRFLAPVLEKAGVTPQIVPQK
AVEPIARRPRAAKKAAEKKTTTKRTAKKAAPAAGKAKKS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgtgcgtggtgcacgtgagcacaacctcaagaacgtctcgatcgagatcccgcgt
gacgcgctcgtcgtcttcacgggcctgtccggttcgggcaagtcgtcgctcgcgttcgac
acgattttcgccgagggccagcgtcgctacgtcgagtcgctgtcagcgtacgcgcgtcag
ttcctcgggcagatggacaagcccgacgtcgacttcatcgaaggtctgagcccggccgtc
tcgatcgaccagaagagcacgaaccgcaacccgcgctccaccgtgggcaccatcacggag
gtctacgactacttccgtctgctcttcgcgcgcgccggtcgtccgcactgccccgtctgt
ggcgagccggtcggcagccagacgccgcagcagatcgtcgacagcatccaggagctgccc
gagcgcacgcgctaccaggtgctcgcccccgtggtccgggcacgcaagggtgagtacgtc
gacctgttcgccgaactgcagacgaagggcttctcgcgcgcccgcgtcgacggcgagatc
gtgtcgctcaccgaaccgccggtgctcgagaagcagaagaagcacaccatcgacgtcgtg
gtcgaccgcctcgtcgcgaaggggccggacgacacgagcggacgccagcgcctcaccgac
tccgtcgagacagctctcggccttgccgacggactcgtcgtcgtcgaaaaggtcgtgcgt
gagggcgaggaggtcgaggggccgctcgagcgccgctactcggagaagctcgcgtgcccc
aacgaccacccgctgtcgatggacgccatcgagcctcgctcgttctccttcaacagcccg
ttcggtgcctgccccgaatgcaccggcctcggtacggaactccaggtcgaccccgacctc
gtcgtgcccgacgaggagaagacgctgcgagacggggccatcctcccgtgggcgcagggc
tcgggtgcggccgactacttcatccgcgtgatgaaggcgctcggcgacgagcagggcttc
gacctcgacacaccctggcgtgccctgcccacccgcgcccgcaccatgctgctcgagggc
aagaaccacaaggttcacgtgcgctaccgcaaccgctacgggcgtgagcgctcgtactcg
acgggcttcgagggcgtcatcccgttcgtcaagcgtcgccactccgagacggagtccgag
tggagtcgtgagcgctacgagggctacatgcgcgaggtcccgtgcccggtgtgcaagggt
gcccgactcaagccggagtcgctcgccgtcaccatcggtggcaagtcgattgccgaggtc
tgcgccctgcccatctcggagtccgcgtacttcctcgacggggtcgacttcgactcgcgt
gagcgtcagatcgccgagcgtgtcatcaaggagatcggcgctcgcctgggctttctgctc
gacgtcggcctcgactacctctcgctcgaccggccggccggcaccctctcgggaggcgag
gctcagcgcatccgcctggccacgcagatcggttccggcctcgtgggtgtgctctacgtg
ctcgacgagccctccatcggtctccaccagcgcgacaaccaccgcctcatcgagacgctg
acccggctgcgcgacctcggcaacaccctcatcgtcgtcgagcacgacgaggacaccatc
gagacggccgactggatcgtcgacatcggtcccggtgccggcgagcacgggggtgaggtc
gtctactccggacctgtcgagggcctcgtcaaggaggagcgctcgatcacgggtggctac
ctctccggccgcctgtcgattcccgttcccccgacgcgtcgcggacaggacgggcggcag
gtcgtcgtcgagggggctcgcgagcacacgctgaagaacgtcgacgttgccttcccgctg
ggcaacctcgttgtcgtcaccggggtctccggctccggaaagtcgacgctcgtcaacgac
atcctctacacctcgctcgccaacgagctcaacggcgcccggcaggtcgccgggcgtcac
aagcgcgtcaccggcatgcagcaactcgacaaggttgtccacgtcgatcagagccccatc
gggcgtaccccgcgaagcaacccggccacgtacacgggtgtgttcgacaacatccgcaag
ctcttcgccgagacgcaggaggcgaaggtgcgcggttaccagccgggccgtttctccttc
aacgtcaagggcggtcgctgcgaggcctgctcgggtgacggcacgctcaagatcgagatg
aacttcctgcccgacgtgtacgtgccctgcgaggtgtgccacggtgcgcgctacaaccgc
gagacgctcgaggtgcacttcaagggcaagacgatcgccgaagttctcgacatgccgatc
gaggaggccgccgacttcttcgaagcggtgcctgccatcgcgcgccacatgcgcaccctc
gtcgacgtggggctcggctacgtccgcctgggtcagcccgcgccgacgctctcgggtggt
gaggcccagcgcgtcaagctcgcgagcgagttgcagaagcgatccgccggacgcaccatc
tacgtgctcgacgagccgaccacgggcctgcacttcgaggacatccgtaagctgctcgac
gtcatccagggtctggccgacaagggcaacacggtcgtcgtcatcgagcacaacctcgac
gtcatcaagtgcgccgactgggtcatcgacatgggtcccgagggcggcttccgcggtggc
acggtcgttgccgagggaactccggagcaaatcgcgcaggttgccgagagccacaccggt
cgcttcctcgcgccggtgctcgagaaggcgggcgtgacgccgcagatcgtgccgcagaag
gccgtcgagccgattgcgcgccgtccgcgggccgccaagaaggcggcggagaagaagacc
accaccaagaggacggcgaagaaggcggcacccgccgccgggaaggcgaagaagtcatga
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