Dermacoccus abyssi: FV141_07175
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Entry
FV141_07175 CDS
T06197
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
day
Dermacoccus abyssi
Pathway
day00860
Porphyrin metabolism
day01100
Metabolic pathways
day01240
Biosynthesis of cofactors
Module
day_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
day00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FV141_07175 (cobD)
Enzymes [BR:
day01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
FV141_07175 (cobD)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QEH93327
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All DBs
Position
1521249..1522187
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AA seq
312 aa
AA seq
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MNARALGLLLGYGADRLLGDPQRGHPVAGFGTWALACERQLYAPSRTRGTCFVVVTTAPW
VGLAVLATHLPASRTLVTAAFTWAALGGRSLEREALPVHELLFEGELEGARQRIRSLVGR
DTSALEAPDLARAVVESLAENQSDAVAATLVWGALAGSPGIVLHRCVNTLDAMVGHRSER
YADFGWAAARLDDVLNWLPARVSLLATAAVVGATDGTSAARRVLTGASRDGARHPSPNAG
PVEAAAAYALGVQLGGLTTYGDRVEDRGQLGDGRPVSVRDIRRAATLTRQVGLVVLGAAV
TATAMGGRLRRR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacgcgcgctcggacttctcctcggttacggtgccgaccgcctgctgggcgac
ccacagcgtggccaccctgtggcgggcttcgggacgtgggctctggcgtgtgagcggcag
ctctacgcacccagccggacgcgcggcacctgcttcgtcgtcgtgacgacggccccgtgg
gtggggctggcggtgctcgcgacgcacctgcccgcctcgcgcacgctcgtcaccgccgcg
ttcacatgggccgccctcggaggccgcagtctcgaacgcgaggcgctccccgtgcacgag
ttgctcttcgaaggcgaactcgaaggcgcccgccagcggatccggtcactcgtgggccgg
gacacgagcgcgctggaggcccccgacctcgcccgcgccgtcgtcgaatcgcttgccgag
aaccagtcggacgccgtggcagccacgctcgtctggggtgctctcgcgggctctcccgga
atcgtgctccaccgctgcgtcaacacgctcgacgccatggtcggacaccggtccgagcgc
tacgcggacttcggctgggccgccgcccgcctcgacgacgtcctcaactggctgccggcg
cgggtcagcttgctcgcgacggctgccgtcgtaggtgcaaccgacgggacgagtgccgcg
cggcgcgtgctcaccggcgcgtcccgcgacggcgcgcggcaccccagccccaacgccggc
cccgtggaagcggctgcggcgtacgccctcggtgtgcagctcggggggctcaccacctat
ggcgaccgcgtggaagaccgcggtcagctgggcgacggtcgtcccgtgtccgtccgtgac
atccggcgcgcggcaacgctgacgcgacaggtcggcctcgtcgtcctcggggccgcagtg
accgcgaccgccatgggtggacggcttcgacgccggtag
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