Dermacoccus abyssi: FV141_07195
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Entry
FV141_07195 CDS
T06197
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
day
Dermacoccus abyssi
Pathway
day00521
Streptomycin biosynthesis
day00523
Polyketide sugar unit biosynthesis
day00525
Acarbose and validamycin biosynthesis
day00541
Biosynthesis of various nucleotide sugars
day01100
Metabolic pathways
day01110
Biosynthesis of secondary metabolites
day01250
Biosynthesis of nucleotide sugars
Module
day_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
day00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FV141_07195
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FV141_07195
01055 Biosynthesis of vancomycin group antibiotics
FV141_07195
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FV141_07195
00525 Acarbose and validamycin biosynthesis
FV141_07195
Enzymes [BR:
day01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FV141_07195
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
Hpr_kinase_C
IF3_N
Motif
Other DBs
NCBI-ProteinID:
QEH93331
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Position
complement(1525901..1526887)
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AA seq
328 aa
AA seq
DB search
MRVVITGGAGFLGSHLGETLLRRGHSVVAVDNFVTGRATNVAHLVGDRFALVEHDVTEPF
DIDGDVDGVLHFASPASPVDYLKMPIETLRVGSMGTQNALELAQRKGARLVLASTSEVYG
DPQVHPQPETYWGHVNPVGPRGVYDEAKRYAEALVLAYRDNRGVDASIVRIFNTFGPRMR
PNDGRAIPNFVRQALAGEPVTVSGDGSQTRSICYVDDLVDGILAMLLETHDPGPVNIGNP
HEISMRDLAQWIIDLTGTSSEIQYIARPTDDPTVRRPDTTKAQALLGWSPKVSVETGLER
TIAWFREHPEADEGHVLTAGETEHILNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtcatcaccggcggggcagggtttctcggctcacacctgggcgagaccctg
ctccgccggggtcattcagtggtggccgtcgacaacttcgtcaccggccgcgccaccaac
gtcgcccacctcgtgggtgatcgcttcgctcttgtcgagcacgacgtgacggaaccgttc
gacatcgacggcgacgtcgacggcgtcctgcacttcgcctcgcccgcctctccggtcgac
tatctcaagatgccgatcgagacgctgcgcgtcgggtcgatgggtacgcagaacgcgctc
gagctggctcaacgcaagggcgcgaggctcgttctcgcgtcgacgtccgaggtctacggt
gacccgcaggttcacccgcagcccgagacgtactgggggcacgtcaacccggtgggtccg
cgcggcgtctacgacgaggccaagcggtacgccgaggctctcgttctcgcttaccgcgac
aaccgtggggtcgatgcgtcgatcgttcgcatcttcaacacgttcggtccgcggatgcgc
cccaacgacggtcgagccatcccgaacttcgtgcgtcaggcgctggccggtgaaccggtg
acggtgagcggcgacggtagccagacccgttcgatctgctacgtggacgacctcgtcgac
ggcatccttgcgatgctgctcgagacgcacgacccgggcccggtcaacatcggcaacccg
cacgagatctcgatgcgtgacctcgcgcagtggatcatcgacctcacgggtacctcgtcc
gagattcagtacatcgcccgcccgacggacgacccgacggtgcgccgtccggacacgacg
aaggcgcaggcgctcctcggctggtcgccgaaggtgagcgtcgagacgggcctggagcgc
accatcgcctggttccgcgagcaccccgaggccgacgaagggcacgtcctcacggcgggg
gagaccgagcacatcctcaaccgctga
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