Dermacoccus abyssi: FV141_07300
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Entry
FV141_07300 CDS
T06197
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
day
Dermacoccus abyssi
Pathway
day03030
DNA replication
day03410
Base excision repair
day03420
Nucleotide excision repair
day03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FV141_07300 (polA)
03410 Base excision repair
FV141_07300 (polA)
03420 Nucleotide excision repair
FV141_07300 (polA)
03440 Homologous recombination
FV141_07300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
day03032
]
FV141_07300 (polA)
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_07300 (polA)
Enzymes [BR:
day01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FV141_07300 (polA)
DNA replication proteins [BR:
day03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FV141_07300 (polA)
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FV141_07300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FV141_07300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QEH93349
UniProt:
A0ABX5Z969
LinkDB
All DBs
Position
complement(1556452..1559121)
Genome browser
AA seq
889 aa
AA seq
DB search
MKRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNAVYGFTSMLINVLRDTEPTHLGVAFD
VSRQTFRTEEYAEYKAGRATTPNEFKGQVSLVKEVLDAMGVAHIELDGYEADDILATLTT
QAVDQGFYEVLLCSGDRDALQLVGDKVTVLYPVKGVSELTRMTPAAVEEKYGVPPERYSD
LAALVGEKSDNLPGVPGVGPKTAAKWLTTYGDLTGLVASVDQIKGKAGESVRAHLDGVLR
NRRLNQLLTDVPLDLGPDDLVRADWNRDEVHRVFDGLEFKVLRDRLFATLGTSEPEAEGN
VDVDGEVVAEGGAEKALSSLTGRTGVHVLGTWARGTGDAAGIGLAGDDGRALYIDLTALT
PDDEKALAAWLADESKPKAMHDAKGPMHALDARGLTLRGLTNDTAIAAYIVRPDQRSYGF
DDLLLRYCHIELPQAGDAATGQGMLELGGTATAETDDVMARAAAVAKLATALDEAVAEVG
GTELMADLEMPVVDVLAGMEKAGIAVDLDELQNLESDYDALVVQAQHDAWDAIGGEQVNL
GSPKQLQTVLFETLGMPKTKKTKTGYTTDAEALADLYEKEPHPFLEALLRHRDSSKLRST
VAGLIKSVADDGRIHTTYQQTIAATGRLSSTDPNLQNIPIRTESGRRIRRVFVVGEGYEC
LMSADYSQIEMRVMAHLSGDEGLIHAFNEGEDLHRFVGSRVFGVEPDGVTPEMRAKVKAM
SYGLAYGLSAFGLSKQLRISTAEAQRLMDGYFERFGGVRDYLRHVVDDARAVGYTETMMG
RRRYLPDLASDNRQRRDMAERMALNAPIQGSAADIMKKAMLGVDEALRDGEYASRVLLQV
HDELILEVAEGEREAVEKLVREHMGSAADLDVPLDVNVGTGASWQDAEH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcttgttgttgctggacggtcattccctcgcctaccgggcgttcttcgcgctg
cccgcggagaacttctccacctccacggggcagcacacgaacgccgtgtacggcttcacc
tcgatgctcatcaacgtcctgcgcgacaccgaacccacccacctcggtgtggccttcgac
gtgtcgcgtcagacgttccgcaccgaggagtacgccgagtacaaggcggggcgcgccacg
acgccgaacgagttcaaggggcaggtcagcctcgtcaaggaggtgcttgacgccatgggc
gtcgcgcacatcgaactcgacggctacgaggccgacgacatcctcgccaccctgaccacg
caggccgtcgatcagggcttctacgaggtgctcctgtgctccggtgaccgagacgccctg
cagctcgtgggggacaaggtcaccgtcctgtacccggtcaagggcgtctccgagctcacg
cgcatgacgccggccgccgtcgaggagaagtacggcgttccgcccgagcgctacagcgac
ctcgcggccctcgtcggtgagaagtccgacaacctgcccggcgtgcccggcgtcggcccg
aagacggcagccaagtggctcacgacctacggcgacctcaccggtctcgtcgcctccgtc
gaccagatcaagggcaaggccggcgagtccgtgcgtgcccatctcgacggtgtgctgcgc
aaccgccgcctcaaccagctgctcaccgacgtcccgctcgacctcggaccggacgacctc
gtgcgagcggactggaaccgtgacgaggtgcaccgcgtcttcgacggtctcgagttcaag
gtgttgcgcgaccgcctcttcgccacgctcggtacgagcgagccggaggccgagggcaac
gtcgacgtcgacggcgaggtcgttgccgagggcggcgccgagaaggccctgtcctcactc
accggacgcaccggcgtccacgtcctcggcacctgggctcgcggcaccggcgacgctgcc
ggcatcggtctcgcaggtgacgacggtcgcgcgctctacatcgacctcaccgcgctcaca
ccggacgacgagaaggccctcgccgcctggctcgccgacgagtccaagccgaaggcgatg
cacgacgccaagggtccgatgcacgccctcgacgcgcgcggactcacgctgcggggtctg
acgaacgacacggcgatcgcggcctacatcgtgcgacccgaccagcgctcgtacggcttc
gacgacctcctgttgcgttactgccacatcgaactcccgcaggcgggtgacgctgccacc
ggtcagggcatgctcgagctcggcggcactgccacggccgagaccgacgacgtcatggca
cgcgcagcagccgtcgccaagcttgccacggcgctcgacgaggccgtcgccgaggtcggg
ggcaccgagctcatggccgacctcgaaatgcccgtcgtcgacgtcctcgccggcatggag
aaggccggtatcgccgtcgacctcgacgagctgcagaacctcgagagcgactacgacgct
ctcgtcgtccaggctcagcacgacgcgtgggacgcgatcggcggcgagcaggtcaacctc
ggttcgcccaagcagctgcagacagtgctcttcgagacgctcggtatgccgaagacgaag
aagacgaagaccggctacacgacggacgccgaggctctcgccgacctctacgagaaggag
ccgcaccccttcctcgaggcgctcctgcgccaccgcgattcctcgaagctgcgctccact
gtggccggtctcatcaagtcggtcgccgacgacggccggatccacaccacgtaccagcag
acgatcgcggccacgggccgcctgagctccaccgacccgaacctgcagaacatcccgatc
cgcaccgagtcgggccgccgcatccgacgcgtgtttgtcgtgggtgagggctacgagtgc
ctcatgtcggccgactactcgcagatcgagatgcgcgtcatggcgcacctgtccggcgac
gagggcctcatccacgcgttcaacgagggcgaagacctgcaccgcttcgtcggctcccgc
gttttcggcgtcgagcccgacggcgtcacgcccgagatgcgcgccaaggtcaaggccatg
tcgtacggcctggcctacggcctgtcggccttcggcctgagcaagcagctacgcatctcc
accgccgaggcccagcgcctcatggacggctacttcgagcgcttcggcggggtgcgtgac
tacctgcgtcatgtcgtcgacgacgcgcgcgccgtcggttacaccgagacgatgatgggc
cgccgccgctatctgcccgacctcgcgagcgacaaccgtcagcgccgcgacatggccgag
cgcatggcgctcaacgcgcccatccagggcagcgcggccgacatcatgaagaaggcgatg
ctcggcgtcgacgaggcgttgcgcgacggcgagtacgcctcgcgcgtcctgctccaggtg
cacgacgaactcatcctcgaggtcgccgagggcgaacgcgaggccgtcgagaagctcgtg
cgtgaacacatgggatctgcggccgatctcgacgttccgctcgacgtcaacgtcggcacc
ggcgcgagctggcaggacgccgagcactga
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