Dermacoccus abyssi: FV141_07540
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Entry
FV141_07540 CDS
T06197
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
day
Dermacoccus abyssi
Pathway
day00220
Arginine biosynthesis
day00240
Pyrimidine metabolism
day00250
Alanine, aspartate and glutamate metabolism
day01100
Metabolic pathways
day01110
Biosynthesis of secondary metabolites
day01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
day00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FV141_07540 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FV141_07540 (carB)
00220 Arginine biosynthesis
FV141_07540 (carB)
Enzymes [BR:
day01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FV141_07540 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_5
RimK
ATP-grasp_3
CoA_binding_2
ATP-grasp_2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QEH93389
LinkDB
All DBs
Position
complement(1605826..1609131)
Genome browser
AA seq
1101 aa
AA seq
DB search
MPKNTDIKSVLVIGSGPIVIGQAAEFDYSGTQACRVLREEGLRVILVNSNPATIMTDPET
ADVTYVEPITPEIVASIIEKERPDAVLATLGGQTALNTAIALHKDGVLEKYGCPLIGANV
EAIELGEDREKFKGVVERCGAESARSYICHSMDDVLAGAEELGYPVVVRPSFTMGGLGSG
FAYDETDLRRMAGAGLQASPTTEVLLEESILGWKEYELEVMRDNVDNVVVVCSIENFDPM
GVHTGDSITVAPSLTLTDREYQRMRDVGIAVIREVGVDTGGCNIQFAINPADGRMIVIEM
NPRVSRSSALASKATGFPIAKIAAKMAIGYTLDEVPNDITGETPASFEPTLDYIVVKVPR
FAFEKFPAADPTLTTTMKSVGEAMALGRNFTEALQKALRSIERKEAQFHWRADDLPTPEM
ARELLEQAKRPTDGRILLVQQALRGGLSVEEVHEATKIDPWFLDQLQLINEVAKEISRAP
QLTPELLRLAKKHGFSDAQLAQLTDMKEDVVRGVRHALGVRPVYKTVDTCAAEFAAQTPY
YYSSYDEESEVLPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALRDAGFDTVMVNCNP
ETVSTDYDTSSRLYFEPLTLEDVLEVVHAEREAGPLAGVIVQLGGQTPLGLARALKAEGV
PIVGTSPEAIDLAEDRGAFGRVLAEANLPAPRHGIAYSADEAVEVAREIGFPVLVRPSYV
LGGRGMEIVYDDDTLRGYVTRATTASPEHPVLVDRFLDEAIEIDVDCLYDGKEMYLGGIM
EHVEEAGIHSGDSACVLPPATLGTEELDRVRASTLALAEGIGVRGLMNVQFALAQDVLYV
LEANPRASRTVPFVAKATSVPLAKAAARVMLGSSIADLRAEGMLPPTGDGSHLPLDAPVS
VKEAVLPFQRFRTAEGEVVDSLLGPEMRSTGEVMGIDADFATSFAKAMLGSGQGLPRSGN
IFVSCANRDKRAMLFPVKRLVDLGFTVLATSGTSDVLRRNGIASTTVRKHSQGQGEDGEK
TIVQRILDGEVGMIVNTPSGQDARADGYAIRAAGTSMNAPVITTVQELAAAVQAIEAGMQ
GEFSVKSLQEHAADLNLFAAR
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaacaccgacatcaagagcgtcctcgtcatcggctccggcccgatcgtcatc
ggccaggccgcggagttcgactactcgggtacgcaggcctgccgcgtgctgcgagaggag
ggccttcgcgtcatcctcgtcaactccaacccggcgacgatcatgaccgacccggagacc
gcagacgtcacctacgtcgagccgatcacgcccgagatcgtcgcctccatcatcgagaag
gagcgcccggacgccgtcctcgccaccctcggtggtcagacggcgctcaacacggccatc
gcgctgcacaaggacggcgtgctcgagaagtacggctgtccgctcatcggcgccaacgtc
gaagccatcgagctcggcgaggaccgcgagaagttcaagggcgttgtcgagcgctgtggc
gccgagtcggcccgttcctacatctgccactccatggacgacgtgctcgccggcgccgag
gagctcggctacccggtcgtcgtgcgtccctcgttcaccatgggtggcctcggctccggc
ttcgcttacgacgagaccgacctgcgccgcatggccggcgcgggcctgcaggccagcccg
accaccgaggtgctcctcgaggagtcgatcctcgggtggaaggagtacgagctcgaggtg
atgagggacaacgtcgacaatgtcgttgttgtctgttccatcgagaacttcgaccccatg
ggtgttcacaccggtgactccatcaccgtggccccgtcgctgacgctcaccgaccgcgag
taccagcgcatgcgtgacgtcggcatcgccgtcatccgcgaggtcggcgtcgacaccggc
ggctgcaacatccagttcgccatcaacccggccgacggccgcatgatcgtcatcgagatg
aacccgcgcgtctcgcgttcgtcggcgctcgcgtcgaaggccaccggcttcccgatcgcc
aagatcgcggcgaagatggctatcggctacaccctcgacgaggtgccgaacgacatcacg
ggcgagacgccggcgagcttcgagccgacgctcgactacatcgtcgtcaaggtgccgcgc
ttcgcgttcgagaagttcccggccgccgacccgaccctcacgacgacgatgaagtcggtc
ggcgaggccatggcgctgggccgcaacttcaccgaggcgctgcagaaggcgctgcgttcc
atcgagcgcaaggaggcgcagttccactggcgcgccgacgacctgccgacgcccgagatg
gcgcgcgagctgctcgagcaggccaagcgcccgaccgacggacgcatcctgctcgtccag
caggcgctgcgtggcggcctcagcgtcgaagaggtgcacgaggccacgaagatcgacccg
tggttcctcgaccagctgcagctcatcaacgaggtggccaaggagatctcgcgcgcaccc
cagctgacgccggaactgctgcgcctggcgaagaagcacggcttctccgacgcccagctc
gcacagctgacggacatgaaggaggacgtcgtgcgcggcgtccgccacgcgctcggtgtg
cgcccggtctacaagacggtcgacacctgtgcagccgagttcgctgcgcagacgccgtac
tactactcctcctacgacgaggagagcgaggtgctgccgcgcgagaagcccgccgtcatc
atcctcggctcgggccccaaccgcatcggtcagggcatcgagttcgactactcgtgcgtg
cacgcctcgttcgcgctgcgtgacgccggcttcgacaccgtcatggtcaactgcaacccc
gagacggtctccaccgactacgacacgagctcgcgcctctacttcgagccgctgacgctc
gaggacgtgctcgaggtcgtccacgccgagcgtgaggccggtccgctcgcgggcgtcatc
gtccagctcggcggccagacgccgctcggcctggcgcgcgccctcaaggccgagggcgtg
ccgatcgtcggcacgtctcccgaggccatcgacctggccgaggaccgcggagcgttcggc
cgcgtgctcgccgaggcgaacctgcccgcgccgcgccacggcatcgcctactcggccgac
gaggccgtcgaggtggcccgtgagatcggcttcccggtgctcgtgcgcccgagctacgtg
ctcggtggccgcggcatggagatcgtctacgacgacgacacgctgcgtgggtatgtcacg
cgtgcgacgacggcgtcgcccgagcaccccgtgctcgtcgaccgcttcctcgacgaagcc
atcgagatcgacgtcgactgcctctacgacggcaaggagatgtacctcggcggcatcatg
gagcacgtcgaggaggccggcatccactccggtgactcggcctgcgtcctgccgccggca
acgctcggcaccgaggagctcgaccgcgttcgcgcctcgacgctcgccctcgccgagggc
atcggtgtgcgcggcctcatgaacgtgcagttcgcgctcgctcaggacgtgctctacgtt
ctcgaggccaacccgcgcgccagccgtacggtgccgttcgtcgccaaggcaacgtccgtg
ccgctcgccaaggccgccgcccgcgtcatgctcggctcctcgatcgccgacctgcgcgcc
gagggcatgctgccgcccaccggggacggttcgcacctgcccctcgacgctccggtctcg
gtcaaggaggccgtgctgccgttccagcgctttcgcaccgccgagggagaggtcgtcgac
tcactcctcggcccggagatgcgctccaccggtgaggtcatgggcatcgacgccgacttc
gccacctcgttcgccaaggcgatgctcggttcgggccaggggctgccgcgctcgggcaac
atcttcgtttcgtgcgccaaccgcgacaagcgcgccatgttgttccccgtcaagcgcctc
gtcgacctcggcttcacggtgctcgcgacgagcggaacgtcggacgtgctgcgccgcaac
ggcatcgcctcgaccacggtgcgcaagcactcgcagggtcagggcgaggacggcgagaag
acaatcgttcagcgcatcctcgacggcgaggtcggcatgatcgtcaacacgccgtccggc
caggacgcgcgcgccgacggttacgcgatccgcgcggcgggaacgtcgatgaacgcgccc
gtcatcacgacggttcaggagctcgccgcagccgtgcaggccatcgaggccggcatgcag
ggcgagttctcggtgaagtcgctgcaggagcacgcggccgacctcaacctgttcgcggcg
cgctga
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integrated database retrieval system
