Dermacoccus abyssi: FV141_08515
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Entry
FV141_08515 CDS
T06197
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
day03016
]
FV141_08515 (truB)
Enzymes [BR:
day01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FV141_08515 (truB)
Transfer RNA biogenesis [BR:
day03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FV141_08515 (truB)
Prokaryotic type
FV141_08515 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QEH93559
LinkDB
All DBs
Position
complement(1813466..1814395)
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AA seq
309 aa
AA seq
DB search
MNDARPQTPDGILVVDKPAGWTSHDVVGRMRRLANTRRVGHAGTLDPMATGVLVVGVNRA
TKLLTFLVGCDKEYTATIRLGQSTVTDDAEGDVVDAPGATREVVTEQALSAAVAALTGDI
EQVPSSVSAIKVDGKRSYSRVRGGEDVELAARPVTVGRFEVLEVRETSADGATRVVDVDV
VVEVSSGTYVRALARDLGAALGVGGHLTALRRTRVGTFTLDAARTLDDISDEVDTGRAPS
VIPMADAAADAFAVHHVTEDEERALTFGQRIVSAPERAETVAAIAPDGRLAAILDESTPK
AKSRVTFPK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgcgcgaccgcagacacccgacggcatcctcgtcgtcgacaaaccggccgga
tggacgtcgcacgacgtcgtcggccggatgcgacgcctcgcgaacacgcgccgggtcggg
cacgccggcaccctcgacccgatggcgaccggcgtgctcgtcgtgggcgtcaatcgcgcg
acgaagctgctcaccttcctcgtcggctgcgacaaggagtacacggccacgatccggctc
gggcagtccaccgtcaccgacgacgccgaaggtgatgtcgtcgatgcgcccggtgccacg
cgcgaggtcgtgaccgagcaggccctcagcgctgctgtcgccgcactcaccggtgacatc
gagcaggtaccgagcagcgtgagcgccatcaaggtcgacggcaagcgctcctactcccgg
gtgcgtgggggagaggacgtcgaactcgccgcccgccccgtcacggtcggccgtttcgag
gttctcgaggtgcgcgaaacgagtgccgatggtgccacgcgcgtcgtggacgtcgatgtc
gtcgtcgaggtctcctcgggcacgtatgtgcgtgccctcgcacgtgacctcggagccgcc
ctcggcgtgggcggccacctcacggccctgcgccgtacccgcgtcggcaccttcaccctc
gacgctgcccgcaccctcgacgacatctcggacgaagtcgacaccggccgggccccgagc
gtcatcccgatggcggacgccgccgcagacgccttcgccgttcatcacgtcaccgaggac
gaggaacgggcgctgaccttcggccagcgcatcgtctcggcaccggagcgcgccgagacc
gtggccgccatcgcccccgacgggcgcctcgcggcgatcctcgacgagagcaccccgaag
gcgaagtcgcgagtcaccttcccgaagtaa
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