Dermacoccus abyssi: FV141_08875
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Entry
FV141_08875 CDS
T06197
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
day
Dermacoccus abyssi
Pathway
day03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
day00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FV141_08875 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_08875 (mutM)
Enzymes [BR:
day01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FV141_08875 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FV141_08875 (mutM)
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FV141_08875 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Col-Pyo_DNase
Auto_anti-p27
zf-RING_4
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QEH93626
LinkDB
All DBs
Position
complement(1890513..1891385)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEVVRRGLADHVVGQAFVTSRVTGARVARRHVPGPDHLADVLRGRRVESAERRG
KYLWLTFAGEGDALVVHLGMSGQILVEAADAPMEKHAHAVFDLDGDASDAAPMQMRFVDQ
RTFGGLYLDELMVAHGREVPSTIAHIAPDPLEDAFDAEAVARLMRRKDVAVKRMLLDQGV
VSGIGNIYADEALWRSGVHGRRLGSRVTKRQLVDLLTAAQDVMREALAQGGTSFDALYVN
VNGASGYFDRSLDAYGQQGKPCRRCGTLIVREQFMNRSSHFCPTCQKPPR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctccccgaagtcgaagtcgtacgtcgaggcctggccgaccacgtggtcggc
caggccttcgtcacgtctcgggtcaccggagcacgggtcgcgcgccggcacgtgccgggc
ccagatcacttggccgacgtcctgcgcggacgccgtgtggagtcggccgagcggcgcggc
aagtacctgtggctgacgttcgcgggggagggcgacgccctcgtcgtccacctcggcatg
agtggtcagattctcgtcgaggcggcggatgcgccgatggagaagcacgcgcacgccgtg
ttcgacctcgacggcgacgcatctgacgctgcgccgatgcagatgcgcttcgtcgaccag
cgaaccttcggtgggctctatctcgacgagctgatggtggcgcacggacgtgaggtgccg
agcacaatcgcgcacatcgcaccagatccgctcgaggacgccttcgacgccgaagcggtc
gcgcgtctcatgcgacgcaaggacgtcgccgtcaagcgcatgcttctcgaccagggtgtg
gtgagcggtatcggcaacatctatgccgacgaagcgctgtggcgctcgggcgttcacggc
aggcggctgggctcgagggtgacgaagcgtcagttggtcgacctgttgacggcagcgcag
gacgtcatgcgcgaagcgctcgcccaagggggcacgagcttcgatgcgctgtacgtcaat
gtgaacggcgcgagcggctacttcgaccgctccctcgacgcctacggccagcagggcaag
ccgtgccggcggtgcggaacgctcatcgtgcgcgagcagttcatgaaccgctcgtcacac
ttctgcccgacctgtcagaagccgccccgctga
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