Dermacoccus abyssi: FV141_13990
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Entry
FV141_13990 CDS
T06197
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
day
Dermacoccus abyssi
Brite
KEGG Orthology (KO) [BR:
day00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
day03032
]
FV141_13990 (gyrA)
03400 DNA repair and recombination proteins [BR:
day03400
]
FV141_13990 (gyrA)
Enzymes [BR:
day01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FV141_13990 (gyrA)
DNA replication proteins [BR:
day03032
]
Prokaryotic type
DNA Topoisomerases
FV141_13990 (gyrA)
DNA repair and recombination proteins [BR:
day03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FV141_13990 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QEH94502
LinkDB
All DBs
Position
2959905..2962670
Genome browser
AA seq
921 aa
AA seq
DB search
MSDDTNLPGDDAADLPEVPAGDPDAPVSDAAAATAGTPGDVETPKVPNTPEARAAVEAPV
AHRVDPIDLNAEMQRSYIEYAMSVIVSRALPDVRDGLKPVHRRIVYAMYDGGYRPDRGYN
KCSRVVGDVMGQYHPHGDWAIYDAMVRLVQPWSMRYPLVDGQGNFGSPGNDGAAAPRYTE
CRMAPLALELVRDIHENTVDFEPNYDGKTMQPTVLPSRFPNLLVNGSAGIAVGMATQIPP
HNLREVADAAQWLLANPEASREALLEECLRRIPGPDFPTGALIMGKKGIEDAYRTGRGSI
TMRAVVNVEEIQGRQCLVVTELPYQVNPDALAEKIAMLVKDGKMAGIADIRDETSGRTGQ
RLVIVLKRDAVAKVVLNNLYKHTQLQQNFGANMLALVDGVPRTLPVSAFIRYWVEHQIDV
IQRRTQYRLDEAEKRIHILRGYLKALDALDEVIALIRRSPTVDEARAGLIDLLDVDEIQA
NAILDMQLRRLAALERQKIIEQHDEIQAQIDDYKDILAKPERQRQLVSDELAEIVDKYGD
DRRSQIVPFDGDMNMEDLIPEEDVVVTITRGGYVKRTKVSEYRSQRRGGKGVRGATLRGD
DVVGHFFTTSTHDWLLFFTNAGRVYRTKGYELPEGSRESKGQHVANLLAFQPGEQIAQVL
RLRTYSDHEYLLLATRNGLVKKTRLSEYDSPRSGGLIAVNLRDGDELVGAKLAEASDDVL
LVSRKGQAVRFAATDDSLRPMGRSTSGVTGMKFRDGDELLSLSVVPEGSNEVERGAAEKL
YVFVVFENGLAKRTPVEEYPTKGRATLGVKVATISERGGDLVGALVVENRDEVMVVMEKG
KIVRSAVSEVRETGRNTQGVQFATPGKGDSIVAVARNAEKEAEEIADEQVGSDANTADDA
EVTNPSEDAVTAENDESGDSE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacacgaacctgccgggtgacgacgcggccgacctccccgaggtgcccgcc
ggagaccccgacgcgcccgtgagcgacgccgcagcggccaccgccggcacgcccggtgac
gtcgagacgccgaaggtgccgaacactccggaggctcgcgccgccgtcgaggccccggtc
gcccaccgcgtcgaccccatcgacctcaacgccgagatgcagcgcagctacatcgagtac
gcgatgagcgtcatcgtctctcgtgcgcttccggacgtgcgtgacggcctcaagcccgtg
caccgccgcatcgtctacgcgatgtacgacggtggctaccgccccgaccgtggctacaac
aagtgcagccgcgtcgtcggtgacgtcatgggtcagtaccacccgcacggtgactgggcc
atctacgacgccatggtgcgcctcgttcagccgtggtcgatgcgttacccgctcgtcgac
ggccaggggaacttcggttcgccgggtaacgacggcgccgccgccccgcgatacaccgag
tgccgcatggcgccgctcgcgttggaactcgtgcgcgacatccacgagaacaccgtcgac
ttcgagccgaactatgacggcaagacgatgcagcccaccgtgctgccgagccgtttcccg
aacctgctcgtcaacggcagcgccggcatcgccgtcggtatggccacccagatcccgccg
cacaacctgcgcgaggtcgccgacgccgcccagtggctgctcgccaaccccgaggcgagc
cgtgaggcgctgctcgaggagtgcctgcgccgcatcccaggccccgacttcccgacgggc
gccctcatcatgggcaagaagggcatcgaggacgcctaccgcacgggccgcggcagcatc
acgatgcgcgccgtcgtcaatgtcgaggagattcagggccgtcagtgcctcgtcgtcacg
gagctgccctaccaggtcaaccccgacgccctcgccgagaagattgccatgctcgtcaag
gacggcaagatggcgggcatcgcggacatccgcgacgagacgtcgggtcgtaccggccag
cgcctcgtcatcgtgctcaagcgtgacgccgtggcgaaggtcgtgctcaacaacctctac
aagcacacgcagcttcagcagaacttcggcgcgaacatgctcgcactcgtcgacggtgtg
ccccgcacgctgccggtcagcgcgttcatccgatactgggtcgagcaccagatcgacgtc
atccagcgacgcacgcagtaccgcctcgacgaggccgagaagcgcatccacatcctgcgc
ggttacctcaaggcgctcgacgcgctcgacgaggtcatcgccctcatccgtcgtagcccc
acggtggacgaggcacgcgccggcctcatcgaccttctcgacgtcgacgagatccaggcc
aacgccattctcgacatgcagctgcgccgcctcgcggccctcgagcgtcagaagatcatc
gagcagcacgacgagatccaggcgcagatcgacgactacaaggacatcctggccaagccg
gagcgtcagcgtcagctcgtctccgacgagctcgccgagatcgtcgacaagtacggcgac
gaccgtcgcagccagatcgtgccgttcgacggcgacatgaacatggaagacctcatcccc
gaggaggacgtggtcgtcaccatcacgcgcggcggctacgtcaagcgcacgaaggtgagc
gagtaccgcagccagcgtcgcggcggcaagggcgtgcgcggcgcgacgctgcgcggcgac
gacgtggtcgggcacttcttcaccacgtcgacgcacgactggctgctgttcttcacgaac
gccggccgcgtctaccgcaccaagggctacgaactgcccgagggctcgcgcgagagcaag
ggccagcacgtcgcgaacctgctcgcgttccagccgggcgagcagatcgcccaggtgctg
cgcctgcgcacgtactccgaccacgagtacctgctgctcgccacgcgcaacggcctcgtg
aagaagacgcgcctgtccgagtacgactcgccgcgttcgggcggcctcatcgccgtcaac
ctgcgtgacggtgacgaactcgtcggcgccaagctcgccgaggcgagcgacgacgtcctg
ctcgtctcgcgcaagggtcaggccgtgcgcttcgccgccacggacgactcgctgcgcccg
atgggccgctccacgtccggtgtcaccggcatgaagttccgcgacggcgacgaactgctg
tcgctcagcgtcgtgcccgagggttcgaacgaggtggagcgcggcgccgccgagaagctc
tacgtcttcgtcgtcttcgagaacggcctcgcgaagcgcacccccgtcgaggagtacccg
acgaagggccgcgcgacgctcggcgtcaaggtcgccacgatctccgaacgaggcggcgac
ctcgtcggcgcgctcgtcgtcgagaaccgtgacgaggttatggtcgtcatggagaagggc
aagatcgtgcgcagcgccgtcagcgaggtgcgcgagaccggccgcaacacccagggcgtc
cagttcgccaccccgggcaagggcgactccatcgtcgcggttgcgcgcaacgccgagaag
gaagccgaggaaattgccgacgagcaggtaggttcggatgcgaatacggcagatgacgca
gaggtgacaaacccctcggaggatgccgttaccgccgagaacgacgagtcgggagacagt
gagtga
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