Drosophila arizonae: 108610439
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Entry
108610439 CDS
T05886
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
daz
Drosophila arizonae
Pathway
daz04382
Cornified envelope formation
daz04512
ECM-receptor interaction
daz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108610439
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108610439
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108610439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
daz04147
]
108610439
00536 Glycosaminoglycan binding proteins [BR:
daz00536
]
108610439
Exosome [BR:
daz04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108610439
Glycosaminoglycan binding proteins [BR:
daz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108610439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108610439
NCBI-ProteinID:
XP_017858025
LinkDB
All DBs
Position
3
AA seq
1889 aa
AA seq
DB search
MLLPRDLTGLSGVLGAVWLFASVVSFANAAKECNTTLCDCKGIKGRMGGFGLKGVPGREG
SPGDVGPPGPPGRVGEKGDFGEYGETGEKGHRGDIGYQGLTGLPGAPGFPGDDGTAGPRG
IDGCDGRPGEQGIPGIPGENGARGPMGKTGPPGETGDAGEGGINSKGTKGSMGVRGVDGV
DGQPGFPGPTGYKGDIGFAGAQGHKGEQGPKGYKGEMGVPESYPMLQGVVGDKGEPGEGE
PGALRYDETLKGYKGFAGPRGDRGPPGMPGEPGPVGRSGLPGPRGEMGERGERGKPGHDG
VQGSPGEKGMKGSPGYSGENGEDGRPGERGEDGFDGTPGVQGPEGPPGIYDPTLDKSLPG
PIGPQGDLGPPGNPGLNGIPGKQGRRGPHGPPGPPGEQGLSGNRGPPGRSQKGEQGDYGL
MGPPGPQGPPGVAGPPGRTGFPGNPGLNLYGPKGQAGQNGIPGVDGYRGDRGEVGITGDK
GLPGEGLNIVGPPGSQGPPGKRGIPGIDGAPGSRGYPGDKGIRGDDCGICHAGPRGMKGV
IGDAGYPGEHGARGMAGITGARGPKGIRGRPGVPGHQGIRGTDGIPGEVGRPGKQGPPGR
VEYTGSLRETEKGDDGDNGRRGDQGQQGDRGEDGWPGVPGAKGEPGLRGDFGDAGRPGVD
GLPGIDGRDGKPGTPPSIPKFYLTGEPGYNGKKGARGDVGSPGFKGDKGEPHPGEIIENR
GEPGDVGYPGEPGFRGPKGETGEPGLKGIMGDMGVPGEVFQGPTGAKGYKGEIGDYGPHG
MPGKPGRDGEPGLPGLDGPKGFRGEPGQYILPGEIGVPGRPGVKGIIGDEGPIGFPGPRG
PPGPKGIKGVHGDDGLEGLKGLPGNKGQRGDIIVGPPGRQGEPGRPGSIAPHGVKGQKGE
VGYRGQVGQNGAKGSIGYPGRRGPIGDAGVPGIPGEPGPAGFAGIPGEQGDRGDIGFDGR
IGDIGPRGLVGEFGPKGLEGEIGPFGYPGIPGVPGTKGVQGDQGVPGRRGAKGVSAYSGI
KGDQGDPGWQGPPGYNGPMGFKGQRGEPGDSMPASDGLPGSKGEVGAPGRNGLPGLHGLK
GQRGDTGYPGQPGIIGDQGDDGPNGYPGRNGLDGLKGEAGEIGLPGSPGEIGDIGDVGYP
GQHGIQGDEGLPGEYGQIGNRGEIGDRGDIGDAGEVIYIGSQTDMRGPPGDNGLRGAQGP
TGPPGMIGAIGYPGPRGERGDIGFEGPAGFDGLPGPKGQQGDKGLRGLIGERLNAEPGEE
GDIGYDGLPGRPGTPGQKGAPGEQGEYGLNGAQGPQGPMLIGPQGPPGDYGYQGIPGRNG
LHGMRGRKGERGDTGRKGEIGETGFSIWGQQGDIGERGRQGMPGLNGAKGEEGASGRPGR
TGPVGPRGPRGPLGDVGWSGIDGVDGLSGEKGEPGVTYSYTYARPGDRGEPGLDGFKGER
GDIGPPGLHGAAGLRGIVGYRGDDGEMGYQGPDGVKGQRGDIGEMGLRGRVGLRGLPGPQ
GDPAPPPPPPKSRGFIFARHSQSVNIPVCPANTNMLWEGYSLSGNVASSRAIGQDLGQSG
SCLMRFTTMPYMFCDFNNVCNYAQNNDDSLWLSTAEPMPMSMTPIQSRDLMKYISRCVVC
ETSTRVIALHSQSMSIPDCPGGWEEMWTGFSYYMTTLDNTGGVGQNLVSPGSCLEEFRAN
PVIECHGHGRCNYYDALASFWLAVIEKQDQFLQPRQQTLKADQTSKISRCTVCRRRGDSF
YTVKRTSASQSSYSSGSNSGYSTGYNTGSNSRDNSAFRSGSSWATNAGLDSNSGAGSRSG
GFNSGSGSNAGFSSNSWSTGGRQQPPNSYSTWSGGYPAAEYRTQPQTLRQPQPLPPTGQY
NRQQTYRNPYQYGGVRQNRRYPRDDTYAP
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgcccagagatctaacgggtctctcgggtgtgcttggcgcagtctggctgttt
gccagcgttgtgtcctttgcgaatgcggcaaaggaatgcaatacaacgctgtgcgactgc
aaaggcatcaaaggacgcatgggcggctttgggttaaagggtgtgcccggtcgtgagggc
tcgcccggtgatgtgggcccgcctggtccgcccggacgtgtcggcgaaaaaggcgatttc
ggtgaatacggcgaaacgggcgaaaagggacatcgcggtgatattggctatcaaggcctg
actggtctaccgggcgctcccggctttcctggagatgatggaactgccggaccacgtggt
atcgatggttgcgacggtcgtcctggcgaacaaggaattcctggtattcctggtgagaat
ggcgctcgtggcccaatgggtaagacaggcccgcctggtgaaactggtgatgctggcgag
ggcggcatcaactccaaaggtaccaagggaagtatgggcgtgcgaggagtggatggcgtc
gacggtcagcctggctttcctggccctaccggctacaaaggagacattggcttcgctggc
gctcagggccacaagggtgagcaggggccaaagggctataaaggtgagatgggcgtgccg
gagagctatccaatgctgcaaggcgtcgtgggcgacaagggcgagcctggcgagggtgag
cctggagctttgcgctatgatgaaactctcaaaggctataaaggctttgctggaccacgt
ggtgaccgaggtcctcccggcatgccgggcgagccaggaccagtaggacgcagcggcttg
ccaggtcctagaggcgaaatgggcgagcgtggagagcgaggaaagcccggtcatgatggc
gtacaaggcagccccggtgaaaaaggcatgaagggctcacctggctacagtggcgagaat
ggcgaggatggtcgaccaggcgaacgcggtgaggacggtttcgatggcactcccggtgtt
cagggacccgagggaccacccggtatctacgatcccaccttggataagtcgctgcccggt
ccaattggaccacagggcgatcttggaccacctggtaatccaggcttgaatggcataccc
ggtaagcaaggacgtcgcggtccacatggaccacctggaccacctggtgagcaaggactg
agtggcaatcgtggcccaccgggacgcagccagaaaggcgaacaaggtgactacggattg
atgggtccacctggtccacaaggtccgcccggagtggctggacctcctggccgcactgga
ttccctggcaatccaggactcaacctctacggtccaaaaggtcaagctggtcagaatgga
attcccggcgttgatggttatcgcggagatcgtggagaagtcggtataaccggtgacaag
ggcctgcccggtgagggattgaatattgttggaccacccggctcgcaaggtccacctggc
aaacgtggcatacccggaatagacggtgcacccggctcccgtggatatcctggtgacaaa
ggcatacgaggtgatgactgtggcatctgccatgccggaccacgtggcatgaagggcgta
ataggcgatgctggttacccaggcgaacacggtgcacgcggcatggctggcatcacgggc
gctagaggacctaagggtattcgtggaaggcctggtgtacctggccaccaaggtatcaga
ggtacagatggtattcctggtgaggtaggtcgccccggcaagcaaggtccacccggccgt
gtcgagtacactggcagcttaagagaaacggaaaagggcgatgatggtgacaatggacgc
cgcggtgatcaaggtcaacagggtgatcggggagaagatggctggcccggcgtgcccgga
gctaaaggagagcctggacttcgtggtgacttcggcgatgcaggtcgtcccggcgtggac
ggattaccaggtattgatggacgcgatggtaaaccaggtacaccaccatccataccgaag
ttttacttaacgggcgaaccaggctacaatggtaaaaagggcgcacgtggtgatgttgga
agccccggctttaagggtgacaaaggtgagccacatcccggtgaaataattgagaatcgt
ggcgagcccggtgatgtgggatatccgggagagcctggcttccgaggacccaagggagag
actggcgagccgggtctgaagggcataatgggtgatatgggagtacctggtgaagtcttc
cagggaccaactggagccaagggctataagggtgaaatcggtgactatggtccacatggc
atgcccggtaagccaggtagggatggcgagcccggcttgccaggattggatggcccaaaa
ggtttccgtggcgagcctggtcaatatattcttcctggagaaatcggtgtgcctggccga
ccaggcgttaaaggcatcattggagacgagggccccattggttttccgggcccaagaggc
ccgcctggaccaaaaggtatcaaaggagtgcacggagacgatggcctcgagggccttaag
ggtctgcccggtaacaagggacagcgcggtgacattatcgttggacccccaggacgacag
ggtgagcctggtcgtccaggcagcattgccccacatggagttaagggtcaaaagggtgaa
gttggttatcgtggacaagttggtcagaatggcgccaagggcagcattggatatccaggt
cgtcgcggtcccattggcgatgcaggtgtgcctggaatcccgggcgagccaggacccgcc
ggctttgctggtatccccggagagcagggagatcgtggagatattggatttgatggacgc
ataggagatattggtccccgcgggcttgtcggcgaattcggacctaaaggtcttgaaggg
gagattgggcccttcggatatccgggaatcccgggtgtacccggcactaagggcgtgcaa
ggtgatcaaggtgtacccggacgtcgcggcgctaagggtgtatccgcttacagtggtatc
aaaggtgatcaaggcgatcctggatggcagggaccacccggctacaatggacccatgggc
tttaaaggccaacgtggtgaaccaggcgattcaatgcccgcctctgatggtttgccaggc
tcaaaaggcgaggttggtgcgcctggtcgcaatggtttgcccggcttgcacggtctgaaa
ggtcaacgtggtgatactggatatcctggccaaccaggaattattggcgatcaaggcgat
gatggtccaaatggatatcccggacgcaatggccttgatggccttaagggtgaggccgga
gaaataggcctccctggctcacctggagaaatcggagatattggcgatgtcggctatcca
ggtcaacatggaatacagggtgatgaaggactaccgggtgaatatggtcaaattggcaac
agaggcgaaatcggagaccgtggtgatatcggtgatgctggtgaggtaatttatattggc
tcccaaactgatatgcgaggtccgcctggagataatggattgagaggagctcaagggcca
acgggtccgcctggcatgattggagctattggttatcctggtccacgtggagaacggggt
gatatcggattcgagggtcctgctggctttgatggtctaccaggcccgaaaggtcagcaa
ggagacaagggcttacgaggtttgatcggcgaaagactcaacgccgaaccgggtgaagaa
ggtgacattggctacgatggcctgcccggacgtccgggcactcctggccagaagggtgca
cctggtgagcagggtgaatacggcttaaatggagcgcaaggaccacagggaccaatgctc
atcggaccccaaggtccgcccggagattatggctatcaaggcatacctggacgtaatggc
ctgcacggcatgaggggaaggaaaggagagcgtggcgacacaggacgcaaaggtgaaatt
ggtgaaactggcttcagcatttggggtcaacagggtgacatcggcgaaagaggtcggcaa
ggtatgcccgggttaaatggtgcaaagggcgaggaaggtgccagtgggcgaccaggccgc
actggcccggtcggcccacgcggaccacgcggcccccttggcgatgtaggctggagtggc
atcgatggtgttgatggactatcaggagaaaaaggtgaaccaggtgttacctattcgtac
acatacgcccgacccggcgatcgtggcgagcccggcctggatggcttcaagggtgagcgg
ggcgatattggaccacctggcttgcatggagcagcgggtctccgtggcatagttggctat
cgaggtgatgatggcgagatgggctaccaaggaccagacggcgttaaaggccaacgcggc
gacattggcgaaatgggtctaagaggacgcgtgggtctacgcggtctgcctggcccacaa
ggtgacccagctccaccaccacctccacctaagagccgtggcttcattttcgcccgacat
tcgcaatccgttaatatacccgtgtgtccagccaatacaaatatgctgtgggagggctac
tcgctgtctggcaatgtggccagcagtcgcgctatcggccaagatttgggacaatccggc
tcttgtcttatgcgctttaccaccatgccctacatgttctgtgacttcaacaacgtttgc
aactatgctcagaacaatgacgacagcttgtggctatccacagctgagcccatgcccatg
tccatgacgcctatccaatccagagacctcatgaagtacatttcacgctgtgtcgtttgc
gagacttcaacgcgggtgattgccctgcattcgcaatccatgtccattccagattgtcca
ggtggctgggaggagatgtggacaggcttcagttactatatgacgaccttggataatacg
ggtggtgttggccaaaacttggtctcacccggctcctgcttggaggaattccgtgccaat
cctgtcatcgaatgccatggccatggacgttgcaattattatgatgctttggcctccttc
tggctagccgttatcgagaaacaggatcagttcctgcagccacgccagcaaaccctaaag
gctgaccaaaccagcaaaattagcagatgtactgtgtgtcgccgtcgtggcgatagcttc
tacactgtcaagcggacttctgcatcccagtccagctatagctccggctccaactcgggc
tacagcacgggctacaacactggctccaactctagagacaactctgccttcagatcgggc
tccagctgggcaactaatgctggcctagactccaattcgggtgcaggctcgagatctggt
ggtttcaactctggctctggctccaatgccggctttagttcgaactcctggtcaacagga
ggcagacagcaaccaccaaactcctactccacatggtcaggtggctatccagcagcggaa
tatcgtacgcaaccacaaacattgcgtcagccacagccactgccgccaacgggccaatac
aatcgtcaacaaacttatcgtaatccatatcaatacggcggagttcgccaaaatcgtcgc
tatccgcgcgatgatacttacgctccttag
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integrated database retrieval system
