Drosophila arizonae: 108610599
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Entry
108610599 CDS
T05886
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
daz
Drosophila arizonae
Pathway
daz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108610599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108610599
03019 Messenger RNA biogenesis [BR:
daz03019
]
108610599
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108610599
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108610599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
108610599
NCBI-ProteinID:
XP_017858279
UniProt:
A0ABM1NTJ3
LinkDB
All DBs
Position
3
AA seq
279 aa
AA seq
DB search
MDILLANVNSLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITKNGQECDKGSACPFR
HIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQ
SKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMNYLAGFCPEGPNCKHMHPRFELPPLADLS
KDQTHKKLPTCHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGENNDDGAPNHPPPPFI
KVPTPLEEITCYKCGHKGHYANKCPKGHLAFLSNQHSHK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggatatacttttggccaacgtaaacagcctgcagttcaaggcagagcgcgatctcatc
gaacaggtgggagccataccactgccgttctatggcatggacaagtccattgccgccgtc
tgcaatttcatcacaaaaaatggccaggaatgcgacaaaggcagcgcctgccctttccgg
cacattcgcggcgatcgcaccatcgtctgcaagcactggctgcgtggcttgtgtaaaaag
ggcgaccagtgcgaatttctgcacgagtacgacatgacgaaaatgccagagtgttatttc
tattcacgcttcaatgcctgccacaacaaagagtgcccgttcctgcacatcgatccacag
agcaaggtaaaggactgtccatggtacaagcgtggtttttgccgacatgggccgcactgt
cgacatcagcatctgcgacgtgtgctatgtatgaactacttggccggcttctgtcctgag
ggacccaactgcaaacacatgcatccacgattcgagctgccgcccctcgccgatctcagc
aaggatcagacgcacaaaaaactacccacgtgccactactgcggcgagctcggccacaaa
gcgaactcgtgcaaacagtatgtgggcagcctggagcatcgcaataacatcaatgccatg
gaccacagtggggagaataatgatgatggtgctccgaatcatccgccgccgccatttatc
aaagtgcccacacctctagaggagatcacctgctacaaatgtggacacaagggccactat
gccaacaagtgccccaagggtcatctggccttcctatcgaatcaacatagtcataaatag
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integrated database retrieval system
