Drosophila arizonae: 108610703
Help
Entry
108610703 CDS
T05886
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108610703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108610703
03012 Translation factors [BR:
daz03012
]
108610703
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108610703
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108610703
Translation factors [BR:
daz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108610703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
NB-ARC
Rad17
ResIII
ABC_tran
SRP54
Motif
Other DBs
NCBI-GeneID:
108610703
NCBI-ProteinID:
XP_017858452
LinkDB
All DBs
Position
3
AA seq
934 aa
AA seq
DB search
MHRGNKSQGRSGKNCSRPPGLKGRDIGMYYRNLARQRKNSDTKYEPKINLSCDVSVPPGV
IERVNEYMDQFKVAREARNKHLDEDFQQKFHHMLSMNFDGFIEETKKQNQDLNLKNRSLD
AHLLDKQKELFQNVDFRARYEDRMKLPTMGHAAEIINAVDKNQVLLIVGSTGCGKTTQVP
QLLLDDCIAKGIGSTCRIVCTQPRRISAITVAERVSYERVETIGHSVGYQIRLESRKPRE
RASITYCTTGVLLQQLQSDPLLRSVSVLLLDEIHERSIETDLLMALLKIILPHRPTLKVI
LMSATVREEDFCNYFNRCPMFRIEGVMHPVEVFYLEDVLAMTGYQFDCRSNKRSRPRLDQ
SDHRIMIEPYIRQVRDKYDSKVLEQLRVPHSEGCEDIEFIASLIYYICNNKSDGAILVFV
PGFSKISQLHNTLKNPRSPLGQRWRNHLLIFPLHAMLPSVEQQSVFRPAPKGKRKVIIST
IIAETSVTIDDVVYVINTGRTKVTDYDIETNIQSLEECWVTHANTQQRKGRAGRVQPGVC
YNLFSRAREALMSEVPTPEILRCKLEAIILSLKVLHIDDPYALFETMIDPPVQRTVSTAI
NLLKRIEALDIDGKLTPLGMHLAKLPIDPQVGKMILISALFRCVDPITSVAAALSYKNPF
YTPLGQEQRVDQAKRRMAQGMHSDHLMIHNTICNYRESVENHRDRDFCYNNFLSHMTLQQ
LERMKSQFSELLSNYKFLNSTNCLDHSSNINSGKIPLLRAIIGGGLYPNMAHLRKARQIK
NRVRAIHNMTTDDGRRVNFHPSSVNSGETGFDSNYFVYYQRQKSTDLYLLDATMVFPMAL
IIFGDGVETGVVDNRHYLSVAQTYYFKCSPETVSVVLNLRSSLQLLLLEKALHPAPIEQN
SDADQLIKSIELLLSIDDKMGDDYEIMSDEIDNI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaggaaataagtcgcaaggacgttcgggaaaaaactgttctcgtccgccagga
ctaaaaggtagagatattggcatgtactacagaaatcttgctcgacaacgtaagaactca
gacaccaaatatgagcccaaaatcaatttgagctgcgatgtaagcgttccgcctggcgtt
attgagcgtgtgaatgaatacatggatcagtttaaggtagcccgggaagctaggaataag
catttggatgaggatttccagcagaaatttcaccacatgttaagtatgaatttcgatggc
ttcatagaagagacaaaaaagcagaaccaagatttgaatttaaaaaacagaagcctagac
gcccaccttctggacaaacaaaaggaactctttcaaaatgtggactttcgagcgcgttac
gaagatcgtatgaaattgccaacaatgggtcacgcagcagaaatcatcaacgcagtggac
aagaatcaagttttgttaatcgtgggcagcaccggctgtggtaaaacaacacaggtgccg
cagcttctgttagacgattgtatagcaaagggaataggatctacttgccgcatcgtgtgc
acgcagcctcgtcgaatctcagcaataacagtggccgagcgcgttagttatgagcgagtg
gaaacaattggacattctgtgggttaccagatacgcctggaaagccggaagcctcgcgaa
cgtgcctctataacgtactgcaccacaggcgtgctcttgcagcagcttcaatctgatccg
ctgttgcgcagcgtgagtgttcttctcctggacgagatacacgagcgaagcattgagaca
gatttgcttatggcattgctcaaaattatactgccacatcggcccaccttgaaagttata
ttaatgagtgcaactgtgcgggaggaagatttctgtaactactttaatagatgcccaatg
tttcgcatagaaggggttatgcatccggtcgaagttttttacctggaggatgtactcgct
atgacaggctatcaatttgactgccggagcaataaacggtcccgtccccggctggatcag
tcagaccacagaatcatgatcgagccttatatacgccaggtgcgcgacaagtacgatagc
aaagtgcttgagcagctgcgagtaccccattccgaaggttgcgaggacatcgagttcatt
gcgagtctcatctattatatatgtaacaataaatcagacggtgctatattggtttttgta
cctggattcagtaagatatcacagttacataacacactaaaaaacccacgttcacccttg
ggacagcgctggcgcaatcatttacttatctttccattgcatgcaatgctgccctcggtg
gagcaacagtccgtgttcaggccagcccccaaaggcaaacgaaaagtaatcatatctacc
atcattgccgaaacttcagtaaccattgatgatgttgtttacgtcattaatacgggacga
actaaagtaactgactatgacattgagacaaacatacaatctcttgaggagtgctgggtg
acgcatgcaaacacgcagcagcgcaaggggcgtgcgggtcgtgttcagccaggcgtctgt
tacaatctgtttagtcgggcacgagaggctctgatgtcagaagtgccaactccagaaata
ttgcgttgcaaactggaagcgatcatacttagtctcaaagtacttcacatcgatgatcct
tacgcattgtttgaaacaatgatcgatccgcctgttcagagaaccgtgagcacagccatt
aatctacttaagcggatagaagcgcttgacattgatggtaagctcacaccgctgggcatg
catctggcgaagcttccaattgatccgcaagtgggtaaaatgattctgatatcagcgctt
ttccgttgtgtggatcccattacatctgtcgcagctgcactctcctataaaaatccgttc
tatacgcccttgggtcaggagcagcgggtcgaccaggctaagcgtaggatggcccaaggg
atgcacagcgatcatctaatgatacataacacaatttgcaactaccgcgaaagcgtagag
aaccatagagatcgcgacttttgctacaacaactttctcagtcacatgacacttcagcag
ctagaacgtatgaagtctcaattttccgagctcctcagtaactataagttcctaaattca
acgaactgtttggaccattcatctaacattaattctgggaaaattcccctgcttcgtgca
ataattggaggcggtctctatcccaatatggctcatttgcgtaaagcacgacaaataaaa
aatcgtgttcgcgcgattcataacatgacgaccgacgatgggcgtcgagtaaattttcac
ccctcatcagtaaacagcggcgagacaggatttgactcaaactactttgtgtactatcag
cggcagaagtcaacggatctctatctgctcgacgctacaatggtgttcccgatggcactt
attatttttggcgatggcgtcgagactggtgtcgtagataatagacattatctgtccgta
gctcagacctactattttaaatgcagtccagaaacggtttcggtagtgctgaatttgcgt
tcaagtttgcaactcttgttgcttgagaaagccttgcatccagcgccaattgagcaaaac
agcgatgctgatcaactaatcaaatccattgagcttctgctttcaattgatgataaaatg
ggtgacgactatgaaatcatgtcggatgagattgacaacatttaa
DBGET
integrated database retrieval system
