Drosophila arizonae: 108611039
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Entry
108611039 CDS
T05886
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108611039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108611039
03036 Chromosome and associated proteins [BR:
daz03036
]
108611039
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108611039
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108611039
mRNA degradation factors
5'-3' decay
Decapping complex
108611039
Chromosome and associated proteins [BR:
daz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108611039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ViaA_N
AAA
Motif
Other DBs
NCBI-GeneID:
108611039
NCBI-ProteinID:
XP_017858962
UniProt:
A0ABM1NVH6
LinkDB
All DBs
Position
3
AA seq
394 aa
AA seq
DB search
MMTEKIVPGHPSLINKGMLSDHQIASNLGDDMGWKSKLKLPPKDNRFKTTDVTDTRGNEF
EEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQI
DPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLI
IATPGRILDLMDKKVADMSHCKILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSAT
FPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaaaaaattgtacccggtcacccaagtttgattaacaaaggaatgctaagt
gatcatcagattgccagtaacttaggcgacgacatgggatggaaatcgaaactgaagctt
cctccaaaggataatcgttttaaaacaacagatgtgacagatacacgcggcaatgaattt
gaagaattttgtctaaaacgagaactactaatgggcattttcgaaaagggttgggaacgt
ccatcgccaattcaagaagctgctatacctatagctttaagtggcaaagatgttttagct
cgggcaaaaaacggcactgggaagactggagcatactgtattcctgtcttagagcaaata
gacccaactaaagactatattcaagcattggtaatggttcctacacgagaactggcgttg
cagacatcacaaatctgtattgaacttgccaagcatcttgatatccgtgtaatggttaca
acgggaggtacaattttaaaggatgacattcttcgtatttatcaaaaagtacaattaatt
attgcgactccgggacgaattttggatttaatggataagaaagtagcagatatgtcccat
tgcaaaatattagtcttggatgaagctgataagctgctttcattagattttcaaggcatg
ctggatcatgttattttaaaattacccaaggatccacaaatacttctgttttctgcaacg
tttccattaaccgttaaaaattttatggagaaacatttgcgtgagccctatgaaataaac
cttatggaagagttaacgctaaaaggagtcacgcaatactatgcgtttgtgcaagagcgt
cagaaagtgcattgcttaaacactctgttttcaaaattgcaaataaatcaatcaataata
ttttgcaactcaacacaacgtgttgagctcctagcaaaaaaaataacagagctcggttat
tgctgctactatattcatgctaaaatggctcaagcacatagaaatagagtatttcacgac
ttccgacaaggtctctgtcgaaacttggtctgctctgatttatttactcgtggcatcgat
gtacaagctgtaaatgttgttattaatttcgattttccgcgaatggcagaaacttatttg
catcgaattggtcgttccggccgttttggacatttaggtaagtaa
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