Drosophila arizonae: 108611100
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Entry
108611100 CDS
T05886
Name
(RefSeq) RNA-binding protein 27
KO
K13192
RNA-binding protein 26
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
daz01009
]
108611100
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108611100
03041 Spliceosome [BR:
daz03041
]
108611100
Protein phosphatases and associated proteins [BR:
daz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108611100
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108611100
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108611100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
PWI
Nup35_RRM
zf-CCCH
RRM_1
zf_CCCH_4
GatC
Motif
Other DBs
NCBI-GeneID:
108611100
NCBI-ProteinID:
XP_017859049
LinkDB
All DBs
Position
3
AA seq
1115 aa
AA seq
DB search
MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEE
TTRFVDRLFDAIASEEYLSMPTPMPVSTANIAELELEPDLDGVAEIEAVVNSSPPSPSPT
TAPKDIVIKADNNQQQLRSDNSSRETAIEASSAMPTDANTTGTHSTKIAFDHKTKDSHSQ
QQQLMHHHHSSTSGGSSVNASGFVRSASPPLRSSGPAGAYAADKENQPRDSRRRRASLRS
RSRSRSRSNERSFRRSRSRDRRINEREKSQRQFRNKSPPGGTSEQRHRRSNNNNSTNSTN
NFDRRRIGNNNSSNNNSSMDERTQRFGKSRHSPRSRSISPESRNARRGANISSNNINNSS
NNMEAAACSSAAVVAPAAPMPLPVSHPVAAMGRQRCRDFDEKGYCVRGETCPWDHGINPV
VFEGINNSALMMSMREYNPDAPEIWARGGPAGVPGVPQPGGGPPQALPVPPQGGPSSINP
FSGNVRACAPHGVPNPADYARQPGQPPQVPAPPPMMPFPFNPTAVTTPLQRQLIPIPVMD
GGVGGGVGSGGGGGLAADMGKRRFELEDSVAIADVPSKMRKLPINSRLGPRVNPNMQQHN
SSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANVAYRSTE
AVLNNRFIKVFWHNDNNSNSGSNNNNNNNNIVNESGNPNVNRKSQYHLHNVPAMPTPNAD
SAKITNTNNNSSQPNQATPLGETNNALAAPTTEQGLASTAAPASMRLKLNANATAANASA
TGVARALTPAVNAATIRKKQEEQQKAMHQLANGLRKRKQELLQSYVKQMKTALELVERMD
QQDAQRAPTLETIKVLQATIDKLRKDVHADQDQLQAQIQQQQQQQQQTLPVKKTKEQQKK
ELLDMELELIAQQQEGNDTTAIQKRLEELQRTLSASTGGGSLSGGGGAKLPGGGARKRAT
YPEGPTRVDRRPKAIVVTGFAAEEADFVLGHFKHFGEISKHDVDREIPQLIISYATRLNA
EQAVLRGKIYKDKRLQISWAPVVSTPAVVPMGAPADKSPGALTTSTSGDKMDNPKQLLHS
SVSESESLLGSDTLPELRLEDEEEDEESEDRSWRR
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgatattggaaaactcggataagctcaaggattggttgagcgttgtgctcgaaccactc
tgcgatgctgactcctcggctttggcgcgctatgtaatcgcgttgctgaaaaaagacaaa
tcggataaagatctcaaacgcatcatgatcgagcaattggatgtgtttctttcagaggag
acgacacgattcgtcgatcgtctattcgatgcgattgccagcgaggagtatttatcaatg
cccactccaatgcccgtatcaacagctaacatcgcggaactggagctggaacctgattta
gatggtgtagctgagattgaggctgttgttaactcatcaccgccgtcgccgtcaccaaca
accgcgccaaaagacattgtgataaaagccgataacaatcaacagcaattaagaagcgat
aatagcagcagagaaaccgccatcgaagcgtccagcgcaatgccaacagatgccaatacc
acgggtacacacagcaccaagatagccttcgatcacaaaaccaaagactctcacagccag
cagcaacagctaatgcatcatcatcacagcagtactagtggaggtagctcagtcaacgca
tcaggctttgtgcgcagcgctagtccgcctctgcgcagcagcggtccagctggtgcctat
gccgctgataaggagaatcagcctcgtgatagtcgccgacgacgcgcctctttgcgttct
cgatctcgytcccgttcccgttccaatgaacgttcgtttaggcgatcacggtcgcgagat
cgtcgcatcaatgagcgcgagaagagccagcgtcagttccgcaataagtcgccgccgggt
ggtacgagtgaacaacgacatagacgaagcaacaataataacagcaccaacagcaccaac
aactttgaccggcgacgaatcggcaacaacaatagcagcaacaacaacagcagcatggat
gagcgcactcaacgattcggcaagagtcgccactctccacgcagtcgttctatttcaccc
gaatcgcgcaatgcgcgacgtggtgccaacatcagcagcaacaacattaacaacagctca
aacaacatggaagcagcggcttgctcctctgctgccgttgtagcccctgctgcgcctatg
ccactgcccgtatcgcatcctgttgctgcaatggggcgtcaacgttgccgcgacttcgat
gaaaagggatattgtgtgcgcggcgagacctgcccctgggatcatggaattaatcctgtg
gtattcgaaggtataaacaattcagcattgatgatgtccatgcgcgagtacaatcccgat
gcacctgagatttgggcacgtggcggccctgctggggtgcccggcgtgcctcagcctggc
ggtggtccaccacaggcactacccgtgccgccccagggtggcccatcaagcattaatccc
ttcagtggaaatgtgcgtgcctgtgcgccgcacggtgtgcccaatcctgctgattatgcg
cgccagccaggccagccgccgcaagtacctgcgcctccgcccatgatgccattccctttt
aatccgacagccgtgacaacgccgttgcagcgtcaactaatacccataccagtaatggat
ggtggggttggaggtggggtaggaagcggcgggggcggtgggctggctgctgacatggga
aaacggcgtttcgagctggaggacagtgtggccatagccgatgtgcccagcaaaatgcgc
aagctgccaatcaatagtcgcctaggacctcgcgtcaatcccaatatgcaacagcacaat
agttccctggagctgcggaaagtgccgcgtggactgaacactatagcgcatctgaacaat
catttcgccaagtttggcaaaattgtcaatattcaagtgtcatacgaaggcgacccggag
gcggcaatcgtaacattctccacgcatgcggaggcaaatgttgcttatcgcagcacggag
gcagtgctcaataatcgcttcatcaaggttttctggcacaatgacaacaacagcaatagc
ggtagcaataataacaacaataacaataacatcgtcaatgagtcgggcaacccgaatgtg
aatcgcaagagtcagtatcatttgcataacgtgcctgcaatgccgacacctaatgcagac
agcgccaagataacgaacacgaacaacaacagcagtcaacccaaccaggccacacccctt
ggagaaacaaataatgcactggcagcaccaactacggagcagggactggcaagcaccgca
gcacccgcctctatgcgtctgaagctcaatgcaaacgcgacagcggccaatgcgtcagca
actggtgtagcaagagctctaacgccggcagtgaatgctgcgacaatacgcaaaaagcag
gaggagcaacaaaaggcaatgcaccagctagcgaatgggctgcgcaagcgtaaacaggag
ctcctccagagctatgtgaagcagatgaagacagcgctggagctggttgagcgtatggat
cagcaagatgcgcagcgtgctccgacgttggaaacgatcaaagttctgcaggcaacgatt
gataagctgcgcaaagatgtgcatgctgatcaggatcagctccaggcccaaatccagcaa
cagcagcaacaacagcagcaaacgcttcccgtgaagaaaaccaaagagcaacagaaaaaa
gaactgctcgatatggagctcgagctaattgcccagcaacaggagggcaacgatacaacg
gctatacagaagcgtctcgaagagctgcagcgcacgctctctgcttcaactggaggtggc
tccttgtctggcggtggtggtgccaagctgcccggtggcggtgcacgtaaacgtgccaca
tatcccgaggggccaacccgcgtcgaccgtcgaccaaaagcaattgtggtcactggcttt
gccgctgaggaagctgattttgtgctgggtcactttaagcatttcggcgagatatccaaa
cacgatgtggaccgtgagataccccaattaataatctcgtacgctacacgtctgaatgcc
gagcaagcagtgctccgtggcaaaatatacaaagataagcgactgcagatatcgtgggca
ccagtggtgtcaactcccgccgttgtacccatgggcgcaccggctgacaagtcgccggga
gcgttaactacttcaacatctggtgataagatggataatccgaagcaattgttgcattca
tcggtcagcgagagcgaatctctgctgggcagcgatactctgccagaactgcggctcgaa
gatgaagaggaggatgaggagtctgaggatcgttcctggcgtcgttga
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