Drosophila arizonae: 108611235
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Entry
108611235 CDS
T05886
Name
(RefSeq) putative ATP-dependent RNA helicase SoYb
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
daz03036
]
108611235
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108611235
Chromosome and associated proteins [BR:
daz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108611235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Motif
Other DBs
NCBI-GeneID:
108611235
NCBI-ProteinID:
XP_017859248
UniProt:
A0ABM1NWB2
LinkDB
All DBs
Position
3
AA seq
1664 aa
AA seq
DB search
MEQQKEPEQCETAEDILITQYVNPQLFCYVKLEQLQTEGGYVRSMEKRLPKFCRPDRQRT
SYWPDKYVIVNYRPVKKLLRGLVVASPARDRFLVWAIDYGFTINCRTSDLYQLPYHLHQR
YINVEWGGIHCVVPHTGGSWSKVAARLLDKRLDEAKRLIFKLRHCSEEHQNLGQLLMDEP
PVDAASYLVEMQCARMENEEVSLEFARRVKQVNQVDVAELNEADVKPSLRVLTVLQLGKV
ICSLPAQVQPHVTSSCPLSKESQQYLDSILGNRYHKLGSMTRNLTCPSKQLVRLEGLSRI
REKLAVPQSAKRLSRIKSRADGSVDTALSRPTEANKVNKRNVVTYYKKSLEEVKEKKTEA
EEQSKNPPISANRGEHDTDSLSTIQQLPEKPTEVQKPSSNDKLQLLSYGLSHLSSDQNPS
SKSANLESTSEPKFVKTIQPYQNKVICVYDRSVKRDSMSASPLQTSSPNLNILKQVNRIF
IPKAIMSSENQPIRPDKLKAIPDSYKITNVFTKPDNLGHYTLSKESIKPTQETSLELNSD
KLERIYKEYSNSNNKPPVSNNSLELQRIYNAIRLPVETNAIAPKICSLENQVLAHSKIPV
QPVHSLGNSLFCPEVLLAMQTMNMKPTQATQRYAWPHLMQGHSLALVDRIGSGRSWCYLP
PLCSQVVSSMGTTGSGVSLGPVALLLADSVANAQALFHQCDQLMTGYKTNILKVVNSHAH
SRQKLRLRLLNSCGILVTTPTHLKQLLQDEMQLIDPRRLKHFIIDDFDRMYAAQSVLLNE
LLQLLQSISKLRLQLVLIAQQWHGKVFLELLRRFDDNPLLLFGDFLEAAVYGRVKLNVAV
LRSNRKIAQLLDYLAAQHPLQRRTIIYCKDEKELAVLRKALTEAGYDCLESIDAARQQVK
QLLLATDAVQQPPLSVGNFELMIHYSLPDSWSKFSYRFRVFSENIINCLLAQKLTTRIVS
FVILDESNSHELPRLVQFFEAHDFEMSEQMQQMVASCRQLIDESRQLCPQILSSGECVQL
YCNRRHQPIRGDFQRPCQAALSQPGTVLRGNIIKVYNPVHFAIMPVSFRGSESHSWQDAP
NMATLRRLSTALELHMSIGQNRRPKRTLNMSDVCVLHRQLKYQRVRIVDLSERLVIVQQM
DEGTELLKVQSMELFECDARFAVEPPLAMDVRLCGLMPPIGEDDWQKEATAWVTKLLTNL
NENQHLQLTVELSMLNVVYANDMAVLQDCPALQTCVRATQLYDELILRNYAKSNEQIIKN
LHKLHVEVVNEQTRFQQELPGLEAGPRADEEAVKQNELDQDKAKQDEGLEEIPKITDCVE
NGELMQSAFSCQINSLDKYSNENVKEMLTKSEGIELQHDSKSPFKNLDNTNDESEKIDTE
INIEKENDCPANHLINKDTLASKESIELQEELQEELQGQPSDSTYLKDSMYTFMEILLKD
LNSDDAALQDAAKNMMEGILATDKTSPQKPNTPKLESNGDILPKSKLQLTPARLASALCC
AAVADNAVRPRVCWHQTLLQLELIIEQEVPQYQLVHRDNVLFYQVTETTPPQRCILNLLG
EVKILSEQQHGYRLHIKLAKVGLRVYWPTLLDSLSAQQHCHWLVYDTERAKIPHSNAGRI
HWMRYIRKQYVQQEGESDDGDDWPSDDRNDLSDIDVGINETADI
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaaaggaaccggagcagtgcgaaacggcggaggacattctgattacacag
tatgtgaatccgcaattgttctgctacgtcaagttggagcagctgcagactgagggcggc
tatgtgcgttctatggagaagcgtttgccgaagttttgtcgtccggatcgccagcgcacc
agttattggccggataaatacgtcattgtgaactatcggccggtgaagaaactgttgcga
gggctcgtcgttgctagtccggctcgcgataggtttctggtgtgggccattgactatggc
ttcaccatcaactgcagaacgtcggatttgtaccagttgccgtaccacctgcatcagcgc
tacatcaatgtcgaatggggcggcattcactgtgtggtgccgcacacgggtggatcgtgg
tccaaggtggcagcacgattgctggacaagcgcctggacgaagcgaagcgtctgatcttt
aagcttcggcattgcagcgaggagcaccagaacttgggtcagctgctgatggatgagccg
ccggtggatgcggccagctatttggtagagatgcaatgtgctcgaatggaaaacgaggag
gtcagcttggagtttgctcgtagagtcaagcaggtgaaccaagtagatgtggcggagctg
aatgaagctgatgttaagcccagtttacgtgtccttaccgtgctccagctgggtaaggta
atctgtagtctgccagcccaagtgcaaccgcatgtgacctcaagctgtccgcttagcaaa
gagtcccagcaatacttggattccattttagggaatcgctatcataaactgggctccatg
acccgtaacctcacctgcccctcaaagcagctggttaggttggagggcctttcccggata
cgtgaaaagcttgcggtaccccaatcagcgaagcgtctcagcagaattaagagcagagcc
gatggctccgtggatacggcgctctcccgtcccacggaagcgaataaggttaataaacgc
aatgttgtaacatattacaaaaagagcctagaagaggtcaaggaaaaaaagacggaagct
gaagagcagtcgaaaaacccgcccataagtgcgaacagaggggagcatgatactgattcc
ttgtctacaatccaacagctccccgaaaaacctacagaagtccagaaaccctcatccaac
gataaactgcagcttctcagctatgggctaagtcatttatcctcggatcagaatccttca
tccaagtctgctaatttggaaagtacaagcgaacccaagttcgtaaagaccattcagccg
tatcagaataaagtgatttgtgtctacgatagatctgtgaagagggactcaatgagtgca
agtccgcttcagacttcatcccccaatttgaatatactaaagcaagttaatagaatattc
atcccgaaagccattatgagcagtgaaaatcaacctatccgaccggataaactaaaagcc
attcctgattcatacaaaattacgaacgtttttacgaagccggataatcttggacactac
acgttgagcaaggaatccattaagcccactcaagagacgtctttggagctgaattcggat
aagctggagcgcatctataaagaatactcaaattcaaataataagccgccagtgtctaac
aattcgcttgagctgcagcgcatctataatgcaatccgtttgccagtcgagactaatgca
atagccccgaagatctgcagtctggagaaccaagtgctggcgcacagcaagattccggtg
cagccggttcacagcttaggcaactcgctcttctgcccggaggtgctgctggccatgcag
acgatgaatatgaagcccacgcaggccacgcagcgctacgcctggccgcacctgatgcag
ggccattccctggcgctggtggatcgcattggcagcggtcgctcctggtgctacttgccc
ccgctgtgctcccaagtggtgagctcgatgggaacgacgggcagtggcgtcagtctgggt
cccgtggcactgctgctggcggactccgtagccaacgcccaggcgctgttccatcagtgc
gatcaactgatgactggttacaagacgaacatcctgaaggtggtcaactcacatgcgcat
tctcgccagaagttgcgactgcgactgctcaattcctgcggcatcctggtcacaacgccc
actcacttgaagcagctgctgcaggacgagatgcagctgatcgatccacgtcgcctgaag
cacttcatcatcgatgacttcgatcgcatgtacgcggctcagtccgttctactcaatgag
ctgctgcaattgctgcagagcatttccaaactccggctgcaattggtgctcatcgcccag
cagtggcatggaaaggtctttctcgagctgttgaggcgcttcgacgataatcctctgctg
ctctttggcgacttcctcgaggcagctgtctatggccgagtcaaactcaatgtggctgtg
ctgcgtagcaataggaagatcgcacagctgctcgactatttggcagctcaacatcctctg
cagagacgcacaatcatctactgcaaggacgagaaggagttggctgtgctacggaaggcg
ttgactgaggcgggctacgactgcctggagtccattgatgcagctaggcagcaagtgaaa
cagttgctattggccacggatgcagtgcagcagcctccgctgtctgtgggcaattttgag
ctaatgattcattacagcttgcccgattcttggtccaagttctcgtatcgctttcgtgtt
ttcagcgagaatattatcaactgtctcttggcccaaaaactgactacgagaatcgtctcc
ttcgtgatcctggacgagagcaatagccacgagctgcctcgtctggtgcagttctttgag
gctcacgactttgagatgagcgagcagatgcagcaaatggtggccagttgtcgccagctg
attgatgaaagtcgtcagctctgcccccaaatcctgagcagcggcgagtgcgttcagctg
tactgcaaccggcggcatcagccaatccgtggggatttccagcggccctgccaggctgct
ctgtcgcaaccaggcactgtgttgcgcggcaacatcatcaaggtctacaatccggtgcac
tttgccattatgcccgtcagtttcaggggcagcgagagccactcctggcaggatgcccca
aatatggccaccctgcgcaggctcagcaccgcgctcgagctgcacatgagcattgggcag
aatcgccgaccgaagcgaacactgaatatgtccgacgtatgcgtcctgcaccgccaactc
aaataccagcgggttcgaattgtggatttgtccgagcgcctggtgattgtgcagcaaatg
gacgagggcacggagctgctaaaggtccaatctatggagctattcgagtgtgatgctcgt
ttcgcagtggagccaccgttggccatggacgttcgtctgtgtggactgatgccacccatt
ggcgaggacgactggcagaaggaggcgacggcgtgggtgacgaagctgctgaccaacctc
aatgaaaaccaacatttgcaattaaccgtagagctgagcatgctcaatgtggtctacgcg
aatgatatggccgtgctgcaggattgcccagcgctacaaacgtgtgtgagggctacgcag
ctgtacgatgagctgatccttcggaactatgccaaatctaatgagcaaatcataaaaaac
ttgcacaagctgcatgtcgaggtagtgaacgagcagacgcgatttcaacaagaattgcca
ggtttagaggctggcccaagggcagacgaagaggcggtgaagcagaatgagctggaccaa
gataaagctaagcaggatgagggtcttgaagagatacccaaaatcacagactgtgtagag
aatggcgagctaatgcaatccgctttcagttgtcagataaattccttagataaatactcg
aatgaaaatgttaaggagatgttaactaagtccgaggggatagagctccaacacgatagc
aaatccccatttaaaaaccttgataatacgaatgatgagtcagagaagattgatacagag
ataaatatcgagaaagaaaacgattgccccgccaaccacttgattaacaaggatacgcta
gcttccaaggaatcaattgagcttcaagaggagcttcaagaggagcttcaagggcagcca
agtgactccacgtacctcaaagacagcatgtatacatttatggagattctgctgaaggat
ctgaattccgatgatgcagcgcttcaagacgcagccaaaaatatgatggaaggaatactg
gcaactgataagacaagcccccaaaaaccaaatactcctaaattggaaagcaatggcgat
atattgccaaagtccaagctacagttaacacccgctaggttggccagtgccttatgctgt
gctgccgtcgccgacaatgcagtgcgtccaagggtgtgctggcatcagactctgctgcag
ctagagctcatcatcgagcaggaagtgccacaataccagctcgtgcatcgggacaatgtc
ctcttctatcaggtcaccgagacgacgccgccgcaacgctgcatactcaatctgctgggc
gaggtgaagatattatcggagcagcagcacggctatcggctgcacattaaactggccaag
gttggcctccgtgtctactggcccactttgctggactctttgtctgcgcagcagcactgc
cattggctggtctatgacacggagcgcgccaagattcctcactccaacgcgggtcgcata
cattggatgcgctacatccgcaagcaatatgttcagcaggagggcgaaagcgacgatggc
gacgattggccatcggatgaccggaatgatttgtcggacatagatgtcggtataaacgaa
actgcagatatatag
DBGET
integrated database retrieval system
