Drosophila arizonae: 108611243
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Entry
108611243 CDS
T05886
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
daz
Drosophila arizonae
Pathway
daz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108611243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daz03400
]
108611243
DNA repair and recombination proteins [BR:
daz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108611243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
RGS
FAM184
Fcf2
Vps53_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
108611243
NCBI-ProteinID:
XP_017859257
LinkDB
All DBs
Position
3
AA seq
919 aa
AA seq
DB search
MEGKSIVSRQEPVLRLDTNARRNFIKFHNKLGEKPSTTVRFYDQTDCYTVHGSDDCEQVA
KIVYKSTAYVHKLLPDDKQETLQFVAMSKPNFELAVRELLLVRNLRVEVYVKRDDWQLEY
RGSPGNLLQFEDILFANKEVLVGNSIISLQIKLEGGAQRRVGVAAVEQNDCQFQLFEFVD
DDFFTELEATVVLLGPKECLLPAADGEYAAVKAMLERNGVMITVPKRGSAAERNDLLQDL
NRLLRFAKGQQEDASGLKELQMQLAAEALRVAIRYLDLVNDAGNLGHYELKQLDLKRFVH
LDSAAVAALNIMPKPGTHPSMPSYRWQSILGVLDHCRTPQGHRLMAQWVKQPLRSAEILN
DRHDIVQCLLESPETLDTLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKI
LQVLLSLGHSTVQSVLCAPFKGFLEDLTGLKQMVEQVVDFEAIEKGEYLVKSTFDGRLMD
LQQTMTELYNKMERIRDKCSEELDLDGKLIKLENVAKLGYHLRTTIKDDSVLRKNKNFRI
VDVIKGGVRFTSDKLEGYADEFTSLRARYEEQQQSIVEEIIQVAVGYAAPLTSLNNELAQ
LDCLVSFAIAARSAPTPYVRPMMLPEGAGQLLLEDVRHPCLELQEHVSFIANSVEFEKDK
CNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSLAKISMVDSILGRVGASDNIIKG
LSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFA
THFHEITKLAETLSTVKNCHMAAVADEDNFTLLYQVRPGVMEKSFGIQVARLANFPEQVV
QNAQEVYNEFEDEHAGKQNEADKALLDKIQVAIEQLSTAGNNTEINVEDLTQLVAQFAKD
IKQLDSDYFKTVLTSSSET
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaatcaatagtgagcaggcaggagccggtgctgcgcctagatacaaatgcg
cgtcgcaattttataaaattccacaacaaactcggcgagaaaccgagcacaacggtgcga
ttttatgatcaaaccgattgctatacggtgcacggcagcgatgactgcgaacaggtggcg
aaaattgtttacaaatccacggcgtatgtgcacaagctgctgccggacgacaaacaggag
acactgcagttcgtggccatgtccaagcccaactttgagctggccgtgcgtgagctgctg
ctcgtgcgcaatttgcgtgtcgaggtttatgtgaaacgcgacgattggcagctggaatat
cgcggctcgccgggcaatctgttgcagttcgaggacatcctgttcgccaataaggaggtg
ctcgtcggcaatagtattatttcgctgcagatcaaactggagggcggtgcacaacggcgt
gtgggtgtggcagccgtggagcagaacgactgtcaattccagttgttcgaatttgtggac
gatgatttctttaccgaactggaggccactgtcgtgctgctggggcccaaggaatgcctt
ttgccggcagccgatggtgaatatgcggctgtaaaggccatgctggagcgtaatggtgtc
atgatcacagtgccaaagcggggcagcgctgccgagcgcaatgatctgctgcaggatctg
aatcgtctgctgcgctttgccaagggccagcaggaggatgcaagcgggctgaaggaactg
caaatgcaattggcagccgaagcactgcgcgtggccatcaggtatctggatttggtcaac
gatgccggcaatttggggcactacgagctcaagcagttggatctgaaacgctttgttcat
ttggactctgcggctgtggccgctctcaacattatgcccaagccgggcacacatccatcc
atgccctcgtatcgctggcagagcatattgggcgtcttggatcattgtcgcacgccgcag
ggtcatcgtctgatggcgcagtgggtgaagcagccgctgcgcagcgctgagatactcaat
gatcgacatgacattgtgcagtgtctgctggagtcgcccgagacgctagatacactcagt
ctggactatttgaagcgtataccagatattctaatgctcaccaaaaaactgatgcgtcgc
aaggcgaatttacaagatctgtttcgcatttatcaagttatattgcgcacgccgaaaatt
cttcaagtgctgctgagccttgggcacagcacagtgcagagtgtgctctgtgcgccattc
aagggttttctggaagatctaacgggcctcaagcaaatggtcgagcaggtggtcgacttt
gaggccattgagaagggcgagtatttggtcaagagcaccttcgatggtcgcctcatggat
ctgcagcagaccatgacggagttgtataacaaaatggaacgcattcgcgacaaatgcagc
gaggaacttgatctggatggcaagctgatcaagctggaaaacgtggccaagttgggctat
catctgcgcaccacaatcaaagatgattcggtgctgcgcaagaacaagaactttcgcatt
gtggatgtgatcaaaggcggtgtacgattcacctccgacaagctggaaggctatgccgat
gagttcacaagcttgcgtgcgcgttacgaggagcaacagcagtcaattgtcgaggagatc
atccaagtggctgtcggctatgccgccccattaacttccttgaacaatgagctcgcccag
ctggattgtttggtcagctttgccatagctgcacgaagtgctccaacgccttacgtacgc
ccaatgatgctgcccgagggcgctggccagctgctgcttgaggatgtgcgtcatccatgc
ttggagctgcaggaacatgttagcttcatagccaatagtgtggagtttgagaaggacaaa
tgcaacatgttcattataaccggtccaaatatgggcggcaagagcacctacatacgctct
gtcggcacagctgttctaatggcccacgttggcgcctttgtgccctgcagtctggctaag
atcagcatggttgactccatactgggacgcgttggcgccagtgataatatcataaagggc
ctgagcacgtttatggtggaaatgattgaaacttcgggcattatcaggaccgcaacggat
aaatcgctggtgatcatcgatgagctggggcgtggcacatctacatacgagggctgcggc
atagcctggtccatagccgagcatctggccaaggaaacgaagtgctttacgctcttcgcc
acgcactttcacgagataaccaagctggccgaaacgttgtccaccgtcaagaactgtcac
atggcggccgtggcagatgaggataattttacgctgctctatcaggtgcgacctggtgtc
atggagaagagctttggcatacaggtggcacgcctggccaattttcccgagcaggtggtg
caaaatgcccaagaggtgtacaacgaattcgaggatgagcatgcgggcaaacagaacgag
gcggataaagcgctgctggacaagatacaagtggccatcgagcagctatcgacggctggc
aacaatacggagatcaatgtggaggatctgacccagctggtggcgcaattcgccaaggat
attaagcagctggacagtgattatttcaagaccgtattaactagcagcagcgaaacttag
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