KEGG   Drosophila arizonae: 108611376
Entry
108611376         CDS       T05886                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
daz  Drosophila arizonae
Pathway
daz03030  DNA replication
daz03410  Base excision repair
daz03420  Nucleotide excision repair
daz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108611376
   03410 Base excision repair
    108611376
   03420 Nucleotide excision repair
    108611376
   03430 Mismatch repair
    108611376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daz03032]
    108611376
   03036 Chromosome and associated proteins [BR:daz03036]
    108611376
   03400 DNA repair and recombination proteins [BR:daz03400]
    108611376
DNA replication proteins [BR:daz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108611376
  DNA Replication Termination Factors
   ELG1-RFC complex
    108611376
Chromosome and associated proteins [BR:daz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108611376
DNA repair and recombination proteins [BR:daz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108611376
  Check point factors
   HRAD17(Rad24)-RFC complex
    108611376
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_11 RuvB_N RCF1-5-like_lid AAA_assoc_2 AAA_14 AAA_16 DUF815 ResIII DEAD AAA_5 AAA_7 AAA_30 PhoH AAA_19 TIP49 AAA_24 Mg_chelatase Gp44_lid bpMoxR
Other DBs
NCBI-GeneID: 108611376
NCBI-ProteinID: XP_017859457
LinkDB
Position
3
AA seq 332 aa
MSGNNGTVARMPWVEKYRPNCLDDLISHEEIISTINRFINQKQLPHLLFYGPPGTGKTST
ILACARQLYSPAHFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCGTFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCIICNYLSKIIPALQSRCTRFRFAPLSPEQMMPRLNKV
VEEENVNITDDGKKALLTLAKGDMRKVLNVLQSTSMAFDVVNEDNVYMCVGYPLRSEIEN
VLQTLLSAATFDSAFDTIEEAKSKRGLALEDIVTELHLFIMRLELPMSVMNKLIIKLAEV
EERLTKGCSETAQTAALVSAFFISRDMVSLES
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtctggaaacaatggtacggttgcgcgcatgccatgggtagaaaaatatcggcccaac
tgcttggatgacttaatatctcatgaagaaataatttcaacgatcaatcgctttattaat
cagaagcagctgccccacttgctcttctatggtccaccaggcacaggtaaaacgagcact
attttggcctgtgcccgtcagctatattcaccagcacattttaagtccatggtacttgag
ctgaatgcgtctgatgatcgtggcattggaattgttcgtggtcagattcttaactttgcc
tcgactcgtaccattttctgtggcacctttaagcttatcatactggacgaggcggatgct
atgacgaatgacgcacagaatgccttgcgtcgcattattgaaaagtacacggaaaacgtg
cgcttctgcatcatttgcaattatctaagcaaaataattcccgctctccaatcgcgttgc
acacgtttccgctttgccccactttccccagagcagatgatgccgcgccttaataaggtt
gtggaggaggagaatgtcaacattacggatgatggaaaaaaggcattgctgaccctcgct
aagggtgatatgcgaaaggttctgaatgtgcttcagagtacttcgatggccttcgatgta
gtcaacgaggataatgtttatatgtgtgtgggatatccgcttagaagtgaaattgaaaat
gtgctacagacactgctatccgcagccacattcgactcggcatttgatacaattgaagaa
gcgaagagtaagcgaggacttgctttagaggatattgttacagaactgcatttgtttatt
atgagacttgaactgcccatgtcggtgatgaataaattaataattaagctggcagaagtt
gaagagagattaaccaagggctgctcggagactgcacaaactgcagcgctggtatctgcg
ttctttataagtcgtgatatggtgtcgctggaaagctag

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