Drosophila arizonae: 108611672
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Entry
108611672 CDS
T05886
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108611672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108611672
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108611672
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108611672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108611672
NCBI-ProteinID:
XP_017859916
UniProt:
A0ABM1NY80
LinkDB
All DBs
Position
3
AA seq
222 aa
AA seq
DB search
MLTQGTKTCADLLLSTDTLSQNEDDMLICLPGDRLCRVEDNIVVGQGTYEQGGYIYASKS
GIINIDESNEKCQIVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESS
YRGLLRKEDVRETDKDRVDIYKSFKPGDVILARVVNQMEQSFMLSTAEAELGVVVAYASD
YRKNRIPMVPIGWSEMQCPQTTIKEPRKVAKVLPESSIKSEK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgttaacacaaggcaccaaaacatgtgccgatttgttgttaagtacggatactttatct
caaaatgaggatgatatgctcatttgcctgcctggagaccgtctgtgtcgcgtggaggac
aacatcgttgtaggtcaaggcacatacgaacaagggggctatatttatgccagtaaatcg
ggaattattaatattgacgaatcaaatgaaaaatgccaaattgtaagtgtacacaagcct
ggcttccatttgaccattccggcaacaggagacgttgtcacagctcgggttctagtgacg
acaccaaagttcgccaagtgtgcgatattttgcgtgaggaatgtgttactcgagagcagt
taccgcggtttgttgcgcaaggaggatgtccgcgaaacggataaagatcgtgtggatatt
tacaagtcattcaagcccggcgatgtcatattggcgcgcgttgtcaaccaaatggagcaa
tcctttatgttaagcacagcggaggcagaactcggcgtggtggtggcctatgctagtgat
tatcggaagaatcgaattcccatggtgcccattggttggagcgaaatgcagtgtccacaa
acgacgattaaggagccaagaaaggtggcaaaagtattgcccgagagttcaattaagtcg
gaaaaataa
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