Drosophila arizonae: 108611695
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Entry
108611695 CDS
T05886
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108611695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108611695
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108611695
Spliceosome [BR:
daz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108611695
Complex C
U4/U6.U5 tri-SnRNP related factors
108611695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
SRP54
Cas3-like_C_2
TsaE
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
108611695
NCBI-ProteinID:
XP_017859948
LinkDB
All DBs
Position
3
AA seq
893 aa
AA seq
DB search
MSSKNRKRTASSSSSAEEPDSEEESRIKDLRERDEFANRLKQRDEERTRKVVEATGGRKA
IEEATKRLKLEHEDRDKIVPHLRVQSRRQYLEKRKEDKVAELEADILDDEYLFEESVLTK
REREERQYKKQLLNIAKEHEKARELERIQRYHMPQDLKKGERSEYVEVDDFEKQPNSEQK
KWEAEQLASARFQFGAKDAKAEEEYELLLDDQIDFIQALTLDGSREKAAKETELTEKERK
RMTLEETRRSLPVYPFKEDLIAAVREHQVLIIEGETGSGKTTQVPQYLVEAGFTADKKMI
GCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSE
PDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAP
IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVL
QDRVKRLGSKIRELIVVPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIY
VIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELE
ENTVPEICRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGEL
TKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTAR
KNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEID
MVSCLPETINVRKAATAGYFYHVARLSKGGNYKTIKHNQTVMIHPNSSLFEELPRWVLYH
ELVFTSKEFMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKGAGRAEMTQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaaaatcgtaaacgcacagcaagcagtagtagcagtgccgaagagcccgac
agcgaggaggagtcccgtattaaggatttgcgtgaacgtgatgagtttgccaatcgctta
aagcaacgcgatgaggagcgaacccgcaaagtggtcgaagccacaggcggacgcaaggca
attgaagaagctaccaagcggctgaaactagagcatgaggatcgagataagattgtgccc
catctgcgcgtgcagtcacgtcgacagtacttggagaagcgcaaggaggacaaagttgcc
gagctagaagcagatatactcgacgacgagtacctctttgaggagagcgtgctaaccaag
cgggaacgggaggaacgtcagtacaagaaacagctgttgaatatagctaaagagcatgaa
aaggcacgtgaactggagcgcattcagcgctatcacatgccccaggatcttaagaaaggc
gaacgatcggaatacgtggaggtggatgactttgagaagcagcccaattcggagcaaaag
aaatgggaggctgagcaattggcctcggcgcgttttcagtttggtgccaaagacgccaag
gctgaggaggaatatgagctgttgcttgacgatcagattgatttcattcaggctctaacg
cttgatggtagtcgcgaaaaggctgccaaggaaacggagctaacagaaaaggaacgcaaa
cggatgactttggaagaaacacgcagatcgttgccggtttatccctttaaggaggatctc
atagcagctgtaagagagcatcaggtgctgatcattgagggcgagactggttctggtaag
accactcaagtaccgcaataccttgttgaggccggtttcacggcggataagaagatgatt
ggatgtacgcagccgcgtcgtgtggctgccatgtccgtggcggctcgagtagcagaagaa
atgggcgttaagctgggcaacgaggtgggctacagcattcgtttcgaggactgcacttca
gaccgcaccatactcaagtacatgacagatggcacactgcatcgagagttcctctctgag
ccagatctggcctcctacagcgtcatgattattgatgaggcgcacgagcgcactttgcat
acggacattctgtttggacttgtcaaggatatagcacggttccgacctgagcttaagctg
ctgatatccagcgctacgcttgatgccgagaagttctctgccttcttcgatgatgctccc
attttccgcatacccggcagacggtatccagtggacatattctatacgaaagcacccgag
gcggattatattgatgcctgctgtgtgtccgtgctgcagattcatgctacgcagccactt
ggcgacatcttggtgtttctcacaggccaggacgagatcgagacgtgtcaggaggtgttg
caggatcgtgtcaagcgcctgggctccaagattcgcgagctcattgttgttcccgtctat
gccaatctgccgagcgacatgcaagcaaaaatctttgagccaacgccgccgaatgcacgc
aaagtgatccttgctacgaacattgcggaaacatcattgaccatagacaatatcatctat
gtcattgatccgggtttcgctaagcaaaacaatttcaattcacgaacgggcatggaatca
ttgatggtggtgcccatctcgaaggcttcggctaaccaacgagcgggacgagctggtcgt
acggcacccggtaaatgctttcgcctatacaccgcctgggcatataagcacgagttggag
gagaatacagtgccggaaatttgtcgaatcaatctgggcaatgcggtgctcatgctcaaa
gctttgggcattaatgatctgatacactttgatttcctcgatccgccgccacacgaaacg
ttagtgttggcactggaacagctatacgcattgggtgcactcaatcatcatggtgaatta
accaaactgggcagacgcatggcagaatttcctgttgatcctatgatgggcaaaatgctg
ttagccagcgaaaagtataagtgctctgaggagatggtcaccatagcggccatgctgtca
gttaatagcgccatattctaccggcctaaggataagatcatacacgctgatactgcgcga
aagaatttcaatcatatgcatggcgatcatctcagcttgctgcaggtctataatcaatgg
gcggagacggattatagtacgcaatggtgctacgagaactttatacaatatcgctccatg
aaacgggcacgagatgtgcgagaacaattggttggtctaatgcagcgagtggaaatcgat
atggttagctgtctgccggagacaattaacgtgaggaaggcagcgacggcaggctacttt
tatcatgtggcacgtttgtcgaagggcggaaattacaagacaattaagcacaatcaaacg
gttatgatacatcccaattcttcgttgtttgaggagttgccacgatgggtgctctatcat
gagctagtattcacctccaaggagttcatgcgtcaggtcattgagattgaaagcaaatgg
ctcctggaggtagcaccccactattacaaggcaaaggagctggaggattcgactaacaaa
aaaatgcctaaaggagccggacgtgcggagatgacgcaataa
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