KEGG   Drosophila arizonae: 108612529
Entry
108612529         CDS       T05886                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
daz  Drosophila arizonae
Pathway
daz03030  DNA replication
daz03410  Base excision repair
daz03420  Nucleotide excision repair
daz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108612529
   03410 Base excision repair
    108612529
   03420 Nucleotide excision repair
    108612529
   03430 Mismatch repair
    108612529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daz03032]
    108612529
   03036 Chromosome and associated proteins [BR:daz03036]
    108612529
   03400 DNA repair and recombination proteins [BR:daz03400]
    108612529
DNA replication proteins [BR:daz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108612529
  DNA Replication Termination Factors
   ELG1-RFC complex
    108612529
Chromosome and associated proteins [BR:daz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108612529
DNA repair and recombination proteins [BR:daz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108612529
  Check point factors
   HRAD17(Rad24)-RFC complex
    108612529
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Rad17 AAA_18 Viral_helicase1 Mg_chelatase nSTAND3 AAA_19 AAA_24 AAA_assoc_2 AAA_11 MeaB AAA_23 ABC_tran DNAX_ATPase_lid AAA_5 MnmE_helical RuvB_N NTPase_1 RNA_helicase DEAD AAA_28 AAA_2 AAA_7 AAA_29 AAA_30 SRP54 MCM AMP-binding_C_3 AAA_3 KTI12 IstB_IS21 bpMoxR FtsK_SpoIIIE AAA_33 ATP_bind_1 SRPRB AAA_25 CbiA
Other DBs
NCBI-GeneID: 108612529
NCBI-ProteinID: XP_017860934
LinkDB
Position
4
AA seq 331 aa
MPEETGIVVVDKRNNLPWIEKYRPVKFDEIVGNEDTVARLSVFSTQGNSPNIIIAGPPGV
GKTTTIQCLARILLGDSYKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQSLRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDAQVLA
KLIEVCQLEQLKYDEDGLEAIVFTAQGDMRQALNNLQSTAQGFGEITGANVFKVCDEPHP
MLLQDMLQHCASNDIHKAYKILAKLWRLGYAPEDIIGNIFRVCKRLNVDEQLKLNFIREI
GITHMKIVDGCNSLLQLTSLLARLCMTAESH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccagaggaaacaggaattgtggttgtagacaagcgcaataatttgccttggattgaa
aagtatcggcctgttaagttcgatgaaattgtaggcaatgaagatacagtcgcccgccta
tccgtcttctccactcagggcaattcgccaaacataataattgcgggaccacctggcgta
ggcaagacaacaactatacagtgcctggcacgtattctgctgggcgacagctacaaggat
gcggtgctcgagttgaatgcatcaaacgaacgtggaatcgatgtagtgcgaaataaaatc
aagatgtttgcccaacagaaggtcaccctgccacgcggccgccataagatagtaatcctg
gacgaggcggacagcatgactgagggtgcacagcaatcgctgcgacgcaccatggaaatc
tatagtaatacaacgcgtttcgcactcgcctgtaatacgagtgagaaaatcattgagccg
attcaatcgcgttgcgccatgctgaggtttagcaaactatcggatgcccaggtgctagcc
aagctaattgaggtgtgtcagctagagcagctcaagtacgatgaggatggattggaggcg
attgtgtttacggcacagggcgatatgcgacaagctcttaataatttgcaatccacggct
cagggattcggtgaaattacgggcgccaatgttttcaaagtttgtgatgagccgcatccg
atgctgttgcaggatatgttgcaacattgtgccagcaatgatatacacaaggcgtacaag
atcttggcgaaattgtggcgccttggctatgcaccggaggatattattggtaatatattt
cgcgtctgcaagaggttgaatgtggacgaacagctgaagttgaacttcataagagaaatt
ggcattacgcacatgaagattgtcgatggttgtaattcgctgctgcagttgactagccta
ttggcgcgtttgtgcatgaccgccgagtcgcattag

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