Drosophila arizonae: 108613161
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Entry
108613161 CDS
T05886
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
daz
Drosophila arizonae
Pathway
daz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108613161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108613161
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108613161
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
108613161
NCBI-ProteinID:
XP_017861923
UniProt:
A0ABM1P3Y7
LinkDB
All DBs
Position
4
AA seq
237 aa
AA seq
DB search
MASSQVSNKSGSGWPRRGSQGQADASISNNGTQKYAPNQALTINRTINLYPLTNYTFGTK
EPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGE
LNAGEDEVEGLKRLLSETLGRQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKE
HKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFNFIYM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgcaagtctcaaacaaatcgggctccggctggccccggcgcggtagccaa
ggccaagcggatgccagcattagcaacaatggtacacaaaaatatgcaccgaatcaggca
ttaaccataaatcgcacaatcaatctttacccattaacgaattacacattcggtaccaag
gagccgctctttgagaaagatccatctgtgccgtcacgttttcaacgtatgagagaagaa
ttcgatcgaattggcatgcgtcgctctgtagaaggtgtgctcttagtgcacgagcatggt
ttacctcatgtactcttgctgcagctcggcaccacatttttcaagctgccaggtggtgag
ttgaatgccggcgaggatgaggttgagggtctcaaacgattgctttctgagacgctgggt
cgtcaagatggtgttaagcaggattggattgttgaggatacgattggcaattggtggcgc
cccaatttcgagcctccgcaatatccatacattccaccacacataaccaaaccaaaggaa
cacaagcgactgttcctggtgcagctacacgaaaaggcactatttgctgtgcccaaaaat
tataagcttgttgcggcgcccctattcgagttgtacgacaattcacaaggctatggaccc
attatatcatcgctgccgcaggcgttgtgcagattcaactttatctatatgtga
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