Drosophila arizonae: 108613312
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Entry
108613312 CDS
T05886
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daz03000
]
108613312
Transcription factors [BR:
daz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108613312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
TFIIA
PSCyt3
DUF4653
Motif
Other DBs
NCBI-GeneID:
108613312
NCBI-ProteinID:
XP_017862178
LinkDB
All DBs
Position
4
AA seq
383 aa
AA seq
DB search
MTSISALLHRNHSHSNSHSHNHSHNHNHNSNGYTSSGSSSHSHHSSSLSPPTTIGAATTP
PPPPPPAVPKLQQQQQQQQLQQQQQQQQQHSSSSNGSSHHDHIKRPMNAFMVWSRGQRRK
MAQDNPKMHNSEISKRLGAEWKLLTESQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKT
LNKSPVPGGGGGGGAGGGSGNNAGLTVVGQLGKEPVQPQHSPHAQGLPHHHHHPHHPHPH
PAHAHAHAHAHHHHAQLSAVAAAAAAAAVSHSHSHSPTSLAAKYGFGSPLELSLPRVPGG
FPGLAHYPLDPTLALDLQARLQAMYAGSIYHPWRYLPLISPDTPPSPPSSSGTGISSYGC
VKSSKSSPVAVVPALATTPPNII
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatctcggcgctgctgcaccgcaatcacagtcacagcaacagtcacagtcac
aaccacagtcacaaccacaaccacaacagcaatggctacacgagcagcggcagcagtagt
cacagtcaccacagcagcagcctctcaccgccaacgacaatcggagcagccacaacgccg
ccgccaccaccgcctccagcggtgcctaaactacagcagcagcagcagcagcagcaattg
caacagcaacaacaacaacaacaacaacacagctccagctcgaatggcagttcgcatcat
gaccacattaagcgaccaatgaacgcgttcatggtgtggtcccggggccagcgacgcaaa
atggcgcaggacaatcccaaaatgcacaattcagagatatcgaagcgtttgggtgccgaa
tggaagttgctcaccgaatcacagaagcgtccattcattgacgaggccaagcgtttgcgc
gcgctgcacatgaaagagcaccccgactacaagtatcggcctcgacgcaagcccaagacg
ctcaacaagtccccggtgccgggtggcggtggaggcggaggcgctggcggaggctcaggc
aacaacgctggactgacggtcgttgggcagctgggcaaggagccagtccagccgcagcac
tcgccgcatgctcagggcctgccgcatcatcaccaccatccgcatcatccacatccgcat
cccgcccatgcgcacgcccacgcccacgcccaccatcaccatgcgcagctgagcgcagtg
gctgctgccgctgccgctgccgccgtctcgcactcccaytcgcactcgcccacctcgctg
gccgccaagtatggctttgggtctccgctggagctgtcgctgccgcgcgtgcccggcggc
ttcccggggctggcgcactatccgctggacccaacactggcgctggacctgcaggcgaga
ctgcaggcgatgtacgccggcagcatctatcatccctggcgctatttgccgctgatcagt
cccgatactccgccctcaccgcccagcagcagcggcacaggcatctcctcctacggctgt
gtcaagtcatccaagtcctcgcccgtcgccgtcgtcccagcgctggccacaacgccgccc
aacattatttga
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