Drosophila arizonae: 108613337
Help
Entry
108613337 CDS
T05886
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108613337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108613337
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108613337
Spliceosome [BR:
daz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108613337
Complex B
108613337
Complex C
U2 SnRNP specific factors
108613337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
108613337
NCBI-ProteinID:
XP_017862220
LinkDB
All DBs
Position
4
AA seq
797 aa
AA seq
DB search
MSNYRGIGGGGFPYKKQPGAGNNMSAVPPPPALSNNRGGGGFRFSFNQSRGGAAAAATAG
NTSKHGYSTLESISQYTNSTNFVGKRKQHMDDDYFDDDDEPPQKAPPEQAYIPAPGSPGA
PAKNDSDSDEDPLEQFMAGIKQQVEKEKVRATDPQQKTNVAPLEKKGVRGDIDDEDDEES
YYRYMEENPNAGMRDEGSDQEIDYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFERNFY
TPHEDIAQLDEEQVRELRHTLGVKVSGAQPPKPVTSFGHFGFDDQLLKAVRKAEYTQPTP
IQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRELRAGDGPIGLILAPTREL
SLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGCEIVVATPGRMIDMVKMKATNL
RRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDILTDPVR
IVQGDLNEANQDITQHVYVFPNPLQKWNWLLCHLVKFLSEGAVLVFVTKKADAETVANNL
LVKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDIARD
IDTHTHRIGRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQTVPDDLMELAMKSSWF
RSSRFKQGKGRKPVNNFMGLGYRERSGNAGGGSGGAGASAGAASKTKGPLGESTKSLSGG
GPATDRYSAIRQAFRSQYSSQFRASSDRTWEQTVPETGVFAAPPPPPPPAAGGNSSTSST
ASGSNADAKRAKKSRWN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactaccgtggcatcggaggcggcggcttcccctataagaaacagcccggcgca
ggcaacaatatgagcgcagtgccgccgccgccggcattaagcaacaatcgtggaggcggt
ggatttcgatttagctttaatcagtccagaggcggcgctgctgcagctgctacagccggt
aacacatcaaagcatggctactcgacgctggagtccatcagccagtacacaaactcgacc
aatttcgtgggcaagcgcaagcaacacatggacgacgattacttcgacgacgacgacgag
ccgccgcagaaagctccgccggagcaggcgtatataccagcgcccggatccccgggtgcg
ccagccaagaacgactcggattcggacgaggatccgctggaacagttcatggccggcatc
aaacagcaggtggaaaaggagaaagtacgtgccacagatccgcagcaaaagacaaatgta
gcaccgctcgagaagaagggagtgcgcggtgacatcgatgatgaggacgacgaggagagc
tactaccgctacatggaagagaaccccaatgccggcatgcgcgacgaaggctccgatcag
gagatcgactacgatgaggatggcaatccgatagctccacccaaaaagaaggacatcgat
cccctgccgcccatatatcactcggagatcgagtatgagcccttcgagcgcaatttctat
acgccgcacgaggacatcgcccagctggacgaggagcaggtgcgcgagttgcgccacacg
ctgggcgtcaaggtgagcggcgcccagccccccaagccagtcacctccttcggccacttc
gggttcgacgatcagctgctgaaggccgtgcgtaaggcggagtacacacagcccacgccc
attcaagcccaggcggtgcccgccgctctgtccgggcgcgacatcatcggcattgccaaa
acgggctccggcaagacggcagcgttcatctggccgctgctcacccatctcatggatcag
cgtgagctccgtgcgggagacggaccaattgggctgattctggcgcccacgcgcgagctc
tctctccagatctacaacgaggccaaaaagttcggcaaggtgtacaacataaacgtggtc
tgctgctacggcggcggctccaagtgggagcagagcaaggcactggagcagggctgtgag
attgtggtggccacacccggtcgcatgatcgacatggtcaagatgaaggccaccaacttg
aggcgcgtcacatttctcgtgctggacgaggcggatcgcatgttccacatgggcttcgag
ccgcaggtgcgctccatttgcaaccatgtgcgcccggatcgacagacgttgctcttctcg
gccacgttcaagaaacgcatcgagcgtctggctcgcgatattctgacagatccggtgcgc
attgtccagggtgatctgaatgaagccaaccaggacattacacagcacgtttacgtgttt
cccaatcccttacaaaagtggaactggctgctctgccatctggttaagttcctctctgag
ggcgctgtcctcgtgtttgtcaccaagaaggcggacgccgagacggtggccaacaatctg
ctggtgaaggagtacaactgcctgctcctgcacggcgacatggaccaggcggaccgcaac
aaggtcatcacgcagttcaagcgcaaggaatgcgacatcctggtggccaccgatgtggcc
gcccgtggcctcgacattccccacatacgcaacgtggtcaactacgacattgcccgggac
attgacacgcacacgcatcgcattggacgcacgggccgtgctggcgagaagggcaacgcc
tataccctggtcaccgacaaggacaaggagtttgctgggcatctggtgcgcaacctggaa
ggtgctgatcaaacggtgcccgacgatctaatggagctggccatgaagagctcctggttc
cgcagctcacgcttcaagcagggcaagggacgcaagcccgtcaacaatttcatgggtctg
ggctatcgcgagcggtcgggcaatgcgggcggcggaagtggcggagctggtgcatctgct
ggcgctgcatctaaaaccaaaggccccctcggcgagtccactaagtcgctgtctggcggc
ggacccgccactgatcgctattcggccatacgtcaggccttccgctcgcaatactcctcg
cagttccgcgcttccagcgatcgcacctgggaacagacggtgcccgagacgggcgtcttt
gccgcaccgccacctccgccgccgccagcagcaggcggcaactcttccacatcctccaca
gcctcaggtagcaatgcggatgcgaagcgcgccaagaagagccgttggaactga
DBGET
integrated database retrieval system
