Drosophila arizonae: 108613429
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Entry
108613429 CDS
T05886
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
daz
Drosophila arizonae
Pathway
daz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108613429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daz03400
]
108613429
DNA repair and recombination proteins [BR:
daz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108613429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF8835
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
108613429
NCBI-ProteinID:
XP_017862370
UniProt:
A0ABM1P584
LinkDB
All DBs
Position
4
AA seq
1192 aa
AA seq
DB search
MSKKLNTSAGGTPKNTLFNYFAKSPVVDKKKLTPSNGSNGAELQKENVQNGNLKEVKKES
KPVARRKLPTATEDSDKEEEIGKGKRKRIVLPESESEEEYESKSEPDFSDDGSDYQPDAK
ESTFSEESASGEEDDDISEPGTEDEPTPKKQRKKSAKNFLNNNNIEEPASKKAKIETPAL
VAGGTFMEKLQQLQSNAKKDAAYDEIVTTTSNLDEPTVWPHQKLDFLQPDKIKDKAGRRP
DHPEYDKSTLHVPEKFLNTLSPAMRQWWVLKADNFDCVLFFKVGKFYELYHGDADVGVNE
LGFTYMRGEFAHSGFPEISFDKMSSILVDRGYKVARVEQTETPDMMTERCKRIKSTKYDK
VVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGTSSKYGICFIDTSIGDFHV
GEFDDDKSCSRLLTLISHNMPVLLLHEKAALSSRTQQILRTVLGGIQKEQLPGAGNQLCS
AEKTLKLLAERYYAGTGNEDNWPLVLRTMQSDTDHLGLTPAEPYKLALKALGQCIHYIAK
CKLEPKVLPMARYQLYVPPDEQQEETAKPKLTSTPLQRSHMVLDATTLSNLRIVGEEHSL
QSTLDHCCTKFGKRLLHHWLCAPSCDLTVLRERQEAIGELLRQPDELQQLRALLAPMPDF
ERHLAQIHLFGNKYIGQTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETLMQLPEMFQR
CESTLLRRLTQLPANGGNYPDLSKQLKFFENAFDHEAAAKAGVVAPQPGMDADYDEVQQR
IAEVEERLQAYLKEQERHFGCRVTYFGSDKKRYQLEVPETHAHKANKSYALEGQVKGKKP
ARRYITTETKAMLKDMQQAEDARNAVLKDLARRLFEKFSNHYEQWKQCIDCVATLDVLAG
LAEYARQQLVICVPELVSGQAQPFIELEEGYHPCANPSTYIPNGLQLGTETEAPLSLLTG
PNMGGKSTLMRQLGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVEL
NETSLILKHATPNSLVLLDELGRGTATYDGTAIAASVVSFLANLKCRTLFSTHYHNLIDF
FHMDKRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPHGIIK
RAYELSKKVEAIALQRKITTKIVTATALGDNKKHDRLNNLKDLLMQLKMCHV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagctaaatactagtgcaggtggtacgccaaagaacacgctgttcaactac
tttgccaaatctccagtcgttgacaaaaagaaactaacgccaagcaatgggagcaatgga
gctgagctccaaaaggagaatgtgcagaatgggaatcttaaggaagtgaaaaaagaatcc
aagccagttgccaggcgcaaattgccaacagctacggaagacagtgataaggaggaggag
attggcaaaggtaaacgtaagcgcattgtattacccgaatcagagagcgaggaggaatac
gaatccaaatcggagccagacttttccgatgatggctcagactatcagcccgatgccaag
gagtctaccttcagcgaggagagcgctagcggtgaagaggatgatgatataagcgagcct
ggcaccgaagacgagcctacgcccaagaagcaacgcaaaaagtccgctaaaaactttctt
aacaacaataacattgaggagcctgctagtaaaaaggctaagatagagacgcccgccttg
gttgcaggcggcacattcatggaaaagctgcagcagctgcaaagtaatgccaaaaaggat
gccgcttacgatgagatcgtgaccaccacatcgaatctggacgagcccactgtctggcca
catcagaagctggacttcttgcagccggacaagatcaaggacaaggctggcaggcgacca
gaccaccctgagtacgacaagagcacattgcatgtgcccgagaagttcctcaatacgctg
tcgccggccatgcgccaatggtgggtcctcaaggcagacaactttgactgcgtgctcttc
ttcaaggtgggcaagttctatgagctgtatcatggcgatgccgacgtgggtgtcaatgag
ctgggctttacgtacatgcgcggcgaattcgcgcactcgggctttccggaaatctctttc
gacaagatgtcctccatactcgtagacaggggttataaggtcgctcgcgtggagcaaacg
gagacaccggacatgatgacggagcgctgcaaacgcatcaagtccactaaatacgacaag
gttgtggctcgcgagatctgtcagatcacagatcgaggcactcaagtgtttggctcacag
tgcgccattggccccaatcatcagcccaactatatgttagccatagtggagcaggatgaa
ggcaccagcagcaaatatggcatttgcttcatagacacctccattggtgatttccatgtg
ggcgaatttgacgatgacaagagctgctctcgcctcttgacactaatctcccacaacatg
cccgtgctgttgctccacgagaaagcggcgcttagctctcgcactcagcaaattctacgc
actgtcctgggcggcatacagaaggagcagctgccgggagctggcaaccagctctgcagt
gcagagaaaacgctgaagctgctagcggagcgctactacgctggcactggcaacgaggac
aactggccgctggtgttgcgcaccatgcagtcggacacggatcacttgggtctcactcct
gcagagccctataaattggcactcaaagctctgggtcaatgcattcactacatagccaag
tgtaagctggagcccaaggtgctgcccatggcacgctatcagctgtatgtgccgcccgat
gaacagcaggaagagacggcgaagccaaaattaacctccacaccgctgcagcgctcgcac
atggtcttggatgcaaccacattgtcgaatttgcgcattgttggcgaggaacactcgttg
cagtccacgttggaccactgctgcaccaagtttggaaagcggctgctgcatcattggctc
tgcgcgcccagctgcgatttgactgtgttgcgcgagcggcaggaggcgattggcgagctg
ctacgccagccggatgaactgcagcagctgcgcgccttgctggcgcccatgccagacttt
gagcggcatttggctcagattcatttgtttggcaacaaatacataggccaaactgaacat
cctgactccagggctatacttttcgaggagaagctctacaataagcagaagctgcgcagt
tttatgagcatactcaagggatttgagacattgatgcagttgccagagatgttccaacga
tgtgaatcaacgctactgcggcgcttgactcagctgccagccaatggcggcaactatccc
gacctcagcaagcagctgaagttctttgagaatgccttcgaccacgaggcggctgccaag
gcgggcgtcgttgcaccgcagccaggcatggacgcggactacgatgaggtgcagcagcgc
atagcagaggtcgaggagcgtttgcaggcctatttgaaggagcaagagcgacactttggc
tgtcgcgttacttactttggctccgacaagaagcgctaccagctggaggtgcccgagacg
catgcccacaaggccaacaagtcgtatgcgctggagggccaggtgaagggtaagaagcca
gctcgtcgctacatcactacggagaccaaggcgatgctgaaggatatgcagcaggccgaa
gatgcccgcaacgctgtgctcaaggacttggcgcgtcgtctcttcgagaagttctccaat
cactacgaacaatggaagcagtgcatcgactgtgtggccacgttggatgtgctcgccggt
ctggcggaatatgcgcgccagcagctggtcatctgtgtgccagagctcgtgtcgggacag
gctcagccctttattgaactggaggagggctatcatccgtgcgccaatccatcgacttat
atacccaacggcctgcagcttggcacagaaacggaggcccctctgtcgttgctcactggc
ccaaatatgggcggcaagagcactttgatgcggcagctcggcttgctggtcatcatggca
caaattggtgctcacattcctgcggccagctgtcggctgtcgcttgtggatcgcattttc
actaggctgggcgctcaggatgatatcctggctggccacagcaccttcctcgtggagctg
aatgaaacctcgctgatacttaagcacgctacaccgaattcgttagtactgctcgatgag
ttgggacgcggcacggccacatatgacggcaccgccattgcagcgtctgtggtgagcttt
ttggccaatctgaagtgccgcaccttgttctccacgcactaccacaatctgattgacttc
ttccacatggataagcgcatcaccctgggccatatggcctgcatggttgagaacgaggac
aatgcagatcccacccaggagacggtcacctttctgtacaaatacacagcgggcgcctgt
cccaaatcgtacggcttcaatgcagccaagctggcgggcatgccacatggcattattaaa
cgcgcttatgagctatcgaaaaaagttgaagcaattgcactgcaacgcaaaatcacaact
aaaattgtgacagcaacggcgcttggagataacaaaaagcacgacagacttaacaacttg
aaagatttgcttatgcagctaaaaatgtgccatgtgtga
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