KEGG   Drosophila arizonae: 108613461
Entry
108613461         CDS       T05886                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
daz  Drosophila arizonae
Pathway
daz03018  RNA degradation
daz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108613461
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108613461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daz03019]
    108613461
   03041 Spliceosome [BR:daz03041]
    108613461
Messenger RNA biogenesis [BR:daz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108613461
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108613461
Spliceosome [BR:daz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108613461
SSDB
Motif
Pfam: LSM LSM14
Other DBs
NCBI-GeneID: 108613461
NCBI-ProteinID: XP_017862436
UniProt: A0ABM1P5F0
LinkDB
Position
4
AA seq 91 aa
MTAVPPPANISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYEN
TPDGRRITKLDQILLNGNNITMLVPGGELAE
NT seq 276 nt   +upstreamnt  +downstreamnt
atgactgctgtgccgccgcccgctaacatatccacacttatgccattggaactggtggat
aaatgcatcggttcgcggattcacatcatcatgaaaaacgacaaggaaatggtgggcact
ctattgggctttgatgatttcgtcaacatgttgctagacgatgtcacagagtacgaaaat
acgcccgatggacgccgaattacaaagctcgaccagatactgctaaacggtaacaacatt
acaatgttggtccctggtggcgagcttgctgaatag

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