Drosophila arizonae: 108613533
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Entry
108613533 CDS
T05886
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108613533
03009 Ribosome biogenesis [BR:
daz03009
]
108613533
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108613533
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108613533
Ribosome biogenesis [BR:
daz03009
]
Eukaryotic type
90S particles
Helicases
108613533
Pre-60S particles
108613533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
108613533
NCBI-ProteinID:
XP_017862551
UniProt:
A0ABM1P5R5
LinkDB
All DBs
Position
2
AA seq
749 aa
AA seq
DB search
MSIREKLLMKKIVKREKMKKELSQKKGKAKQVAPETPVEKAAKNKPKKQKRPVEPEEEEL
EKSEAKQSVPEPPVGKAGKNKLKKQKRPAEPEEEELKKSEAKQSAPEPPVGKAGKNKLKK
QKRPVDPEEDDLEDDFQQQRQSKGKKRQQQKKKPQIEVANSDSESESEEEEEENAVSGSE
AEDDEGDEEIDSEAADSADAGEEDEPVPAKKSKLQPKAAKKAATANDKATEEDVPFSVES
SLAALDHRDSDDRTFASLKGAVSEATLRAIEEMGFTEMTEIQAKSLTPLLKGRDLVGAAQ
TGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGL
VMGGSNRQVESEKLSKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFE
EELKQIINLLPKRRQTMLFSATQTERIDALSKLALKKEPIYVGVHDNQETATVEGLEQGY
IVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKR
TTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSG
HALLMLRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLISKNYFLNQSAKEAFK
SYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKRVGGGGFGY
YKQMNERGGGHKQRVFKQINRDQAKKFMR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccgggaaaaactcctaatgaaaaaaattgttaagcgtgagaaaatgaagaag
gagctctcacagaaaaagggtaaagcgaagcaggtagcaccggaaacgccagtcgaaaag
gctgccaaaaacaagccgaagaaacagaagcgacctgtggagcctgaagaagaagagttg
gaaaagagcgaagcgaagcagtcagtgccagagccaccagtgggaaaggctggaaaaaac
aagctgaagaaacaaaagcggcctgcggagcctgaagaagaagagttaaaaaagagcgaa
gcgaagcagtcagcgccggaaccaccagtcggaaaggcgggaaaaaacaagctgaagaaa
caaaagcgacctgtggatcctgaagaagatgacttggaagatgatttccaacagcagcgg
cagagcaaaggcaagaagcgccagcagcagaaaaagaagccacaaattgaggtcgcaaac
tccgattcagagtcagaatcagaagaagaagaagaagagaacgcggtgagcggtagtgaa
gcagaggatgatgagggcgacgaggagatagatagcgaagctgcagactcagccgatgcg
ggtgaggaggacgagcctgtgccggccaagaaatccaagttacagcctaaagcagctaaa
aaggcggccacagcaaatgacaaagctactgaggaagatgtacccttctctgtggaatcg
tctttggcggcactggaccatcgggattcggatgatcgcacctttgcctcgctcaaaggc
gccgtctctgaggctacgttgcgtgccatcgaagagatgggcttcactgagatgaccgaa
atccaagccaagtccttgacgccgctgctcaagggccgagatttggtgggtgctgcccag
actggctcaggcaaaaccctcgctttccttatacccgccgtggagttgatcaataagttg
aggtttatgccacgcaatggtacgggcgtcattatcatctcgcccacacgcgagttgtcc
atgcagacgttcggtgtgctcaaggagctgatggcacatcatcatcatacctacggctta
gtcatgggtggctccaatcgtcaggtggagagcgagaagctgagcaaaggcatcaatatt
ctggtggctacgccaggacgtctgttggatcatttgcagaactccccggatttcctgtac
aaaaacttgcaatgtctgattatcgatgaggtggatcggatactggagattggttttgaa
gaggaactcaagcagattatcaatctgctgccaaaacgccgtcagactatgttattctcg
gccacacagacggagcggattgatgcgctgtccaagttggcgctcaagaaggagcccatc
tatgtgggcgtgcatgataaccaggagacggccaccgtcgagggacttgagcaaggctac
attgtctgtccgtccgaaaagcgtttgctggtgctcttcacgttcctcaaaaagaatcgc
aagaagaaggtcatggtcttcttctcctcatgcatgtcggtcaagtaccatcacgagctc
ttcaactacatcgatctgccggtcacatccatacatggcaagcaaaagcaaacgaaacgg
acgacgaccttctttcagttctgcaatgccgagtcgggcattctgctctgcacggatgtg
gcggcgcgtggcctggacataccgcaagtcgattggattgtgcaatacgatccgccagat
gatccgcgcgagtatattcatcgtgtgggtcgtacggctcgcggctctggcacttcggga
catgctttgctgatgctacggcccgaggaattgggcttcttgcgctatctgaaagcagcc
aaggtgccgctcaatgaatttgagttctcctggcagaagattgccgacatacagctgcag
ctagagaaattgatatcgaaaaactacttcctcaatcagtccgccaaggaggcgttcaag
tcgtatgtgcgcgcctatgattcgcatcagctgaaacagatattcaacgtgaacacgctg
gacttgcaggcggtggccaagagctttggctttctggtgccgccagtggttgacctcaaa
gtgggcgctgccaagcgcgagcggcccgagaagcgagtgggtggcggtggctttggctac
tacaaacagatgaacgagcggggcggcggccacaagcagcgcgttttcaagcagatcaat
cgggatcaggccaagaagtttatgcgttaa
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