Drosophila arizonae: 108613644
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Entry
108613644 CDS
T05886
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
daz04147
]
108613644
00535 Proteoglycans [BR:
daz00535
]
108613644
00536 Glycosaminoglycan binding proteins [BR:
daz00536
]
108613644
Exosome [BR:
daz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108613644
Proteoglycans [BR:
daz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
108613644
Glycosaminoglycan binding proteins [BR:
daz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108613644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
108613644
NCBI-ProteinID:
XP_017862697
UniProt:
A0ABM1P661
LinkDB
All DBs
Position
4
AA seq
1066 aa
AA seq
DB search
MRSLSYVVGLVMLCLVPAHESLELVGQSIKDEMGEHMLTDIMYDNQYTGIDFVSADDGYP
AFKLLATANVKSPSTLMLPEKLYEFAILVKYRLNSLKGGYLFSVVDSQETVLQLGVHLSP
VVKNSYNVTLVYGQPDVPAGRKLATFPVPNVPDKWNSIAFQVYSNNVTFYYDCVLQNATE
VVRDPFELSFNKTAVLFIGQAGSVFHGHFEGYLVQIYVYENPEGFKFQCKAPELTTAVPV
EENEISTESVAEAPVDPDQEMNSPPDEPIVDENDITREDFWSIDNVATDIFDDSGIQPNG
QTQLTHERPYRGIKGEKGDRGPKGDSIRGPPGPPGPPGPKGDTASYPPFVETPSPGAKYT
GECTCNASDILEAFKDNEAIRETLRGPPGPQGRDGKTGAPGLTGATGVTGARGPEGPQGE
KGEPGVDGMPGVMGPPGPPGPPGLPESYDESLMGNSMTGLRGSTVTQAGPKGAPGEKGEP
GRPGERGEKGHKGAHGPAGPKGEPGAPGLPGLAGQPGDGNGTKGERGEKGEKGMRGRRGG
TGPAGPIGPPGKPGPMGDIGHSGRPGMIGPKGDTGPKGAKGDAGGRDGMKGDKGDRGNDG
RDGLPGPPGLPATTGGDGDSSGVQYIPMPGPPGPPGPPGPPGLPGLSITGPKGEAGMDSR
SFFGDASYYGRPGARSSLDELKALRELQDLRDRPTDGTAEPPRQTSHSHKHEEAPHGFAM
GMGDGEELPYFSASSSNMNMRIVPGAVTFQNIDEMTKKSALSPPGTLAYITEEEALLVRV
NKGWQYIALGTLVPIATPAPPTTVAPSLRFDLQSKNLLNSPPPLLNTPTFTTAPEYETWY
PRMLRVAALNEPYAGDLQGIRGADFACYRQGRRAGLLGTFKAFLTSRVQNLDSIVRPADW
ELPVVNTRGDVLFNSWKGVFNGQGGFFSQAPRIYSFSGKNVLTDPLWPLKLVWHGSLPNG
ERSMDTYCDAWHSSSHEKFGYASNLLGNKLLDQERQPCDGKLIVLCVEALSQDRRKKRDV
SNSRSHSHSHSHSHSHSHSRSHSHDELELEFTTAEEYAEHLDNLQV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccctttcgtacgtcgtggggctcgtgatgctgtgcctggttccggctcatgaa
tcactcgaactggtgggccaatccattaaagacgaaatgggcgaacatatgcttacggat
atcatgtacgacaatcagtacacgggcatagactttgtcagcgcagacgatgggtacccg
gccttcaagctactggcgacggcaaatgtgaagtccccatcgacgctgatgctgccggag
aagctctacgaatttgccatactggtcaaatatcgcctgaactcgctgaagggcggctat
ctattcagcgtagtcgactcgcaggagacggtgctgcagcttggcgtccatctgtcgccg
gttgtcaagaacagctacaatgtgacgctcgtttatgggcagcccgacgttccggcgggt
cggaaactggccacttttccggttcccaacgtgccggacaaatggaattcgattgcattc
caggtgtacagtaacaatgtgactttctactatgactgcgtactgcagaacgccacggag
gtggtgcgggatccgttcgagctgtcgttcaataagaccgcggtgctcttcatcggccag
gcaggttccgtgttccatggccacttcgagggctatttagtacaaatctatgtgtatgag
aatccggaaggctttaaatttcaatgcaaggccccagagttaacgacggccgtgccagtg
gaggaaaatgaaatatccacagagtctgttgctgaagcaccagttgatcccgatcaagaa
atgaactccccacctgatgagcccattgtcgatgagaatgacattaccagagaggatttt
tggtctatagataatgtggcaactgacattttcgacgacagtggtattcagcccaacgga
cagacgcagctgacgcacgagagaccatatcgtggcattaagggcgaaaagggtgatcga
ggacccaagggcgatagtatacgcggtccacctgggccgcccggtccgccgggccccaaa
ggtgatacagcctcgtatccgccctttgtggagacaccaagtccgggggctaaatacact
ggcgaatgtacatgtaatgcgtctgatatcctggaagccttcaaggacaatgaagcgata
cgggaaacgttgcgcggcccgcccggtccgcagggcagagatggaaagaccggagcccct
ggacttaccggtgccactggcgtaactggcgctcgcggcccggaaggtccgcagggggag
aagggcgagccaggcgtcgacggcatgcccggagtgatgggtccacccggacccccgggc
ccgcctggcttgccagagagctatgatgaatccttaatgggcaactcgatgaccggccta
cgcggctccaccgttacccaagcaggacctaaaggagcaccaggcgagaaaggtgagccc
ggacgtccaggagagcgcggtgagaagggtcacaaaggcgctcacggacccgctggaccc
aagggtgagcccggagcaccaggcctacccggattggccggccagccaggcgacggcaac
ggcaccaagggcgaacggggcgagaagggcgagaagggcatgcgcggccgacgcggcggc
accggaccggccggaccaattggaccacccggcaaaccgggacccatgggcgatatcggc
cactcgggacgccctggaatgatcgggccgaagggtgatactggacccaaaggtgccaaa
ggagacgccggtggccgtgatggaatgaaaggcgacaaaggtgatcggggcaacgatggc
cgtgacggattgcccggaccacctggcctgccggcaacaacaggtggcgacggtgacagc
agcggtgtacagtacatacccatgcctggtccgccggggccgcccggtccacccggacca
cccggcttgccgggcttatcgataaccggacccaagggagaggcgggcatggactcgcgc
agcttcttcggagatgcctcctattacggacgaccaggtgcgcgctcatctttagacgaa
cttaaagcactgcgagagctgcaagatctgcgcgatagacccacagatggcacagccgag
ccaccgcgccagacgtcgcactcgcacaagcacgaggaggcgccccatggctttgccatg
ggcatgggagatggcgaggagctgccgtacttttccgcatcatcatcgaacatgaacatg
agaatcgtgccaggtgcagtcaccttccagaacatagacgaaatgacaaagaagtcggcg
cttagcccccccggcaccctggcgtacattaccgaggaggaggcgctgctcgtgcgcgtc
aacaagggctggcagtatatagcgcttggcaccttggtgcccattgccacgccagctccg
cccaccacagttgcgccctctctgcgatttgacttacaatcgaaaaacctgctgaacagt
ccacctccattgctcaacacaccgacgtttacaaccgcgcccgaatatgaaacgtggtat
ccgcggatgcttcgcgtggcagccctcaatgagccctatgccggcgacttgcagggcatt
cggggcgcggacttcgcctgctatcgccaaggccggcgagcgggactgctgggcacattc
aaggcgttcctcacctccagggtgcagaatctggactctatagtgcgtccagccgactgg
gagctgccagtcgtaaacacccgcggcgatgtgctcttcaattcgtggaaaggtgtcttt
aacggccagggtggcttcttctcccaggcaccgagaatctatagcttcagcggcaagaat
gtgctgacagacccgttgtggccactcaagctggtctggcacggctcactgccgaacgga
gagcgctccatggacacctattgcgatgcctggcactccagctcgcacgagaagttcggc
tatgccagcaacctgctgggcaacaagctactcgatcaggagcgccagccctgcgacggc
aagctgattgtgctctgcgtggaggccctgtcgcaggatcggcggaaaaaacgcgacgtc
agtaacagtcgcagtcacagtcacagtcacagccacagccacagtcacagtcacagtcgc
agtcacagtcacgacgagctagagctggagttcacaacggccgaggagtacgccgagcat
ttagataatttacaagtgtaa
DBGET
integrated database retrieval system
