KEGG   Drosophila arizonae: 108613649
Entry
108613649         CDS       T05886                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
daz  Drosophila arizonae
Pathway
daz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108613649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:daz03041]
    108613649
Spliceosome [BR:daz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    108613649
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 PRP4 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 Beta-prop_WDR19_1st WD40_like WD40_RFWD3 WD_LRWD1
Other DBs
NCBI-GeneID: 108613649
NCBI-ProteinID: XP_017862716
LinkDB
Position
4
AA seq 540 aa
MSDDDDIQYIKRQRTLHYGSLEETERKRQTGVASSVTGTTPAATTTAAQLEDIDSDEDYE
ETNKKSNATKVGMPPPTAASLANKIDDDYFDLETEMERDKVALLEEFERKKRARQINVST
DDAEIKNNLRQLNEPICYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKLQQREQE
ATWYHEGPETLRVARLWLADYSLPRARDRLERARQALEVPSATRAGRMVEMQKKLQSLAP
LCSQVGDTRPVSSAAFNEDSSLLMTASWSGLCKLWSVPNCELKQTMRGHASYVGGVALRP
GVKLDEENVVAMASGGHDGAVKLWGFGNEESIADITGHMPHRVSKVAFHPSGRFLATACY
DSSWRLWDLEQKTEVLHQEGHAKPVHCLSYQSDGSVLVTGGLDAFGRVWDLRTGRCIMFL
EGHLGAIFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQDGGS
FLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDVSPNSQYIATTSFDRTFKLWAPDS
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgtcagatgacgatgatatccagtacataaagcgacagcgtaccctgcattatggctcg
ctggaagaaacagaacgcaagcggcaaactggcgtggcgtcttctgttaccggcacaacg
ccggctgcaacaacaactgccgcccagctggaagacattgattctgacgaggactatgag
gagactaacaaaaagtccaatgccacaaaagttggcatgccaccgcccactgcagcgtcg
ttggccaacaaaattgacgatgattacttcgatttggagaccgagatggagcgcgacaag
gtggcgttgctagaggagttcgagcgaaaaaaacgagcacgacaaataaatgtatccaca
gacgatgccgagatcaaaaacaatttgcgacaattaaacgagccaatttgctatttcggt
gagggtccagcggaacgacgtcgacgacttaaggagctgctcgccagtttgggtgaaaac
gctatcaagcagaagcagaccgaggaggaggagcgtaagctgcaacaacgtgaacaggaa
gccacatggtatcacgagggacccgaaacactgcgtgtggcacgcctttggctcgcggac
tattccctgccacgtgctcgcgatcgccttgagcgcgctaggcaggcattagaagtgccc
agcgcgacgcgagccggtcgtatggtggagatgcaaaagaagctacagtcattggcaccg
ctctgctcccaggtgggagacacgcggcccgtaagtagtgcagccttcaacgaggactct
tcgctgctgatgactgcctcgtggtcgggcctatgtaagctctggagtgtacccaactgc
gagttgaagcaaacgatgcggggccacgccagctatgtgggtggcgtagcgctcaggcct
ggagtaaagctggatgaagaaaatgttgtggccatggcttcgggcggccacgatggcgct
gtcaaattgtgggggtttggcaacgaagaatccattgctgacataactggccacatgcca
catcgcgtgtccaaggtagcattccacccatcgggccgctttcttgcgacagcctgctac
gattcgtcttggcgtttgtgggatctggaacaaaagacagaggtcctacatcaggaggga
cacgctaagccggtgcattgcctcagctaccagtccgatggcagtgttctggtgaccggc
ggcttggatgccttcggccgtgtctgggatctgcgcacgggccgttgtatcatgttcctt
gagggccacttgggggctatattcggcgtagacttttcgcccaatggctttcatatagcc
accggctcgcaggacaacacctgtaaaatctgggacttacgtcgtcgtcagcccgtttac
accataccagcgcacacaaatctcatttcggatgttaagtaccagcaggatggcggtagc
ttcttggttacctgctcctacgattcgaccacaaagatctggtctaacaaaacatggcag
ccgctgaagacactgcaggggcacgacaataaggtgatttccgttgatgtctcccccaat
tcgcagtatatagcgacaacatcgttcgatcgcaccttcaagctgtgggcgccagatagt
tga

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