Drosophila arizonae: 108614265
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Entry
108614265 CDS
T05886
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108614265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108614265
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108614265
mRNA degradation factors
3'-5' decay
Pan complex
108614265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
DUF4797
Pkinase
Senescence_reg
Roughex
Motif
Other DBs
NCBI-GeneID:
108614265
NCBI-ProteinID:
XP_017863792
LinkDB
All DBs
Position
4
AA seq
796 aa
AA seq
DB search
MDPIFFSPSNGIPSESKLATYMNRQNVAQTSGYGLNNGNVNVNGNGNGNGFSLLNLDASL
AVNKKSQVTPQSPEFIPTRISSSPNFYPPYHMNNGLNGVNGLTTTTAAAAAAAAAAAAAV
ATAAAPASASTTASSSPSTAAAAVTVSGSSGKLANGGNSASILSMQKTNIVATVNITQQQ
QQQQQKQQQQQQPALVNDSVVGSSAPIAIIPNPAAAPFVSSMSAQTPLKARAAMMRQDSP
TAALIGGEKSPPHGMTPHGASPIPTTLPASVHQENVGGTIYFYPTANAQNSQPVVNSVVV
DAAHPAHPAHHGVVSAVAPLSAVPSQLLYAGHVYPGPASNVITMQPKTQLESAFFMPDEM
RSDILGRNEISNLIMDAAEAAQHALPLEVDNYHALYPLEPPAQPMHTKLTLPASTYRATH
NSTGLKYCLRRLHGFRLQSTKCMTLVEMWKKLQHTNVVQLREVFTTKAFGDNSLVLVYDY
YPGSQTLLAKYFTPAPETNGYTDPFQGEARPFSHKSNMQRTNNGPLLPESTIWSIIMQLT
AGLRAIHQAGLACKILDPTKIIVTGKRVRFSSCCISDITQFDPNAANPLALVNMHQQDDL
TALGRLVLALACRCLQSVQRDNVQASIDMVTRNYSTDLRNFIVYLFTTNNRRSVTDLMPM
IGARFYTQLDALQAQVDMQEDELAKEMENGRLYRILVKLNSINERPDFNLDCTWSETGDR
YMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSYAEL
KNCLENAFSELMSAAN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatccaattttcttttcgccttcaaatggtataccctctgaaagtaaattagccaca
tatatgaatcgacagaatgttgcccaaacgtcgggctatgggctgaataacggtaatgtt
aacgttaatggtaacggtaacggtaatgggttctcactacttaacttggacgcgtcccta
gctgttaataaaaagtctcaggtaacaccacaatcgcccgaattcattccaacgcgcata
agttcgtcgcccaatttctatccgccgtaccacatgaataatggtctgaatggtgtcaat
gggttaacaacaacgaccgcagcagcagccgcagccgccgccgccgctgccgccgcagtt
gcaactgcagcagcgcccgcctccgcctccaccacagcgtcctcgtcgccatcgacggcg
gcagctgcagtcaccgtctctggctcgtcaggcaagctggcgaatggtggcaactccgct
tccattctctcgatgcagaagacgaatattgtggcaacggttaacattacgcaacagcaa
cagcagcagcaacaaaagcaacagcaacaacagcaaccggcactggttaacgattcagtc
gtcggcagctcggcgcccatagcgattataccgaatcctgcggcggctcccttcgtgagc
agcatgtccgcccaaacgccgctcaaagccagagccgcaatgatgcgacaggactcgccg
acagcggcgctgatcggcggcgagaagtcaccgccacacggcatgacgccacacggagca
tcgcccatacccactacattgccagccagcgtgcatcaggaaaacgtggggggcaccatt
tacttttatccaactgccaatgcacagaacagccagccggttgtcaactcggttgtggta
gatgccgcacatcccgcacatccggcgcatcatggcgttgtcagtgctgtggcacctttg
agtgcagtgccctcgcagctgctgtatgcgggacatgtgtatccgggtccggcgtcgaat
gtgattacgatgcagccaaagacgcagctggagtcggccttcttcatgccggacgagatg
cgcagcgatattctgggccgcaatgagatctccaatttgattatggatgcggctgaggcg
gcgcagcatgcgttgccactcgaggtggataactatcatgccctctacccactggagccg
ccggcccagcccatgcatacgaaactaacgctgccggcgagcacgtacagggcgacgcac
aatagcacagggctgaagtactgcctgagaagattacacggctttcgcttgcagtccaca
aagtgcatgacgctcgtggagatgtggaagaagctgcagcacacgaatgttgttcaactg
cgtgaggtgttcacgacaaaagcatttggtgataactccttagtattagtgtacgactat
tatcccggctcacagactttgctagccaaatactttacgccagcgccagagaccaacggc
tacacagatccattccaaggcgaggcacgccccttcagtcataagagcaacatgcagcgc
acaaataacggacctctgctgcccgaatcgactatttggtccatcatcatgcagctcacc
gcaggcctgagagccatacatcaagcgggactggcctgcaaaatactagatcccacaaag
atcattgtgacagggaaacgtgtgcgcttcagctcgtgctgcatctcagatatcacgcag
ttcgatccaaatgcagccaaccccttagcattggtcaacatgcatcagcaggacgatcta
actgcattgggtcgcttagtattagcgttagcctgccgctgtttgcagtccgtgcagcgg
gacaatgtgcaggcgagcattgatatggtaaccagaaactactccaccgatctacgtaat
tttattgtttacctcttcaccacgaataaccgccgctctgtgacggatttgatgcccatg
attggagcacgtttttatacgcagctggatgcgctgcaagcacaggtggacatgcaggag
gatgagttggccaaggagatggagaacgggcgactatatcgcattttagttaaactaaat
agcatcaacgaacgacccgacttcaacctggactgcacttggtcagagactggtgataga
tatatgctgaaattattccgtgattttctatttcattccgtcaccgaggatggccgaccc
tggttagatcatgcgcacattgtacaatgcctcaataaactggacgcgggctccatcgag
cgcgtgcaattaatgtcacgcgatgagcaatcggttttaattgtctcctatgctgaactc
aagaattgtctggagaacgccttctccgaactgatgagtgcggccaactga
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