Drosophila arizonae: 108614532
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Entry
108614532 CDS
T05886
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
daz
Drosophila arizonae
Pathway
daz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108614532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108614532
03036 Chromosome and associated proteins [BR:
daz03036
]
108614532
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108614532
Chromosome and associated proteins [BR:
daz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108614532
PBAF complex
108614532
GBAF(ncBAF) complex
108614532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
108614532
NCBI-ProteinID:
XP_017864188
LinkDB
All DBs
Position
2
AA seq
1215 aa
AA seq
DB search
MNTLGPKKDGSPNVEFFQSPETLQGFESIRLWLQKNCKKYLAHSSEPITKESLAQLLILF
LQYVEAKLGKNSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKN
PTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFETRLREILDNRRVEIVTDEED
ATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPDNIPENPESPA
ERWRVSASWILDLEQYNEWMAEEDYEVDELGKKKTHKQRMSIDDIMSFGDDKKKPTTSSG
TGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEV
HKATHSALQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQAMSAGDGDNSQT
GKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSK
NKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
IDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKEGGVD
CDKGSGGALGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMKNRTAASMSREWTDQ
ETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPI
PFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASS
GGKFNPNFGLANSGIAGTGNDKDDDESKEGNNTSSTAAGNDEDAKDVNKKDDDAKSKDKT
KSDKLGTATDSSSTSATSSTTTTPTTTTAGAAAAATSNSTDKKSKDSSPSSAAADKINKT
DKTGKTASNSSPTETGASNDIEIKTEDNSGDGETKDGSNDASSGGAPAKDGAFSENNMQT
AAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGL
EYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQVGAAVGAMAMPPQQQQQ
QQQQTLPPPPHQQHAQQQQPQQQHPLQPPPPQQLGAPAVQHQPLPSHVAAAAPPNGAPFT
APTAVVPAATAPPTPPGELPAPSTQAPTPMDTTPPASAPPVAEAASVAAVAPSSAPAPSI
PAASVAAANPPPPSS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaacactctcggtcctaaaaaggacggaagtcccaacgttgagttttttcaatcacct
gagacgctgcaaggttttgagtctatacggctatggctacaaaagaattgtaaaaagtac
ttggcgcatagctcggagccaataacaaaggaatcacttgcacagttgctaatactattc
ttgcaatatgtggaagcaaaattggggaaaaactcggcagaaccgccggcgacgagaatc
ccgatgcgttgttttttggatttcaaaaacggtggagggctatgtataattttctctacc
atgtttcgttttcgcgccgagcaacgtggcaagaaatttgacttttccattggcaagaat
cctaccagaaaggatcctaacatacaattactgatcgagatcgagcaagctttagtggag
gcagatctctatcgtataccctacatttacatcagaccagagattgagaagagttttgaa
acacgactacgtgagattcttgacaatcgacgtgttgaaattgtcaccgacgaggaagat
gccacgcacattgtctatcccgtggtggatccacatcccgatgaatatgctcgacctata
ttcaagcgtggcaatcatgtaatgcttcattggtactacttcccagagtcatatgactcc
tggacactgaatagtttcgatttgcctgataatatacccgagaatccggaatcgcccgca
gagcgttggcgggtgtctgcctcgtggattttggatctggagcagtacaacgagtggatg
gcagaggaagactacgaggtcgatgagttgggcaaaaaaaagacgcacaaacagcgtatg
tccattgatgacataatgtcctttggcgatgacaaaaagaagccgaccacgagcagtggc
actggtaaacagaagcgacgtcgctctccatcgcccactacctccacatccacatcgaag
ccgggcaagcgaaagcgctccccagcagtcatacacaagaagtcgcgcaacgatgacgat
gatgaagatcttactcgggatctcgatgatccaccggcggagcctaatatccaggaagtg
cacaaggcaacgcattcggcactgcaatcgactgctagcccagcacctggcggaaaatcg
cgtgcggacaacgatatgatgcctattaagggtggcaccatgactgatctggacgatgaa
atgactggcggcagtgctgcccaagcgatgtcagctggcgatggcgacaattcacagacg
ggcaagaccagcgacaacagcaatacccaagaattctcatcgtctgccaaggaagacatg
gaggataatgtgaccgagcagacgcatcacatcattgttccctcctattccgcctggttt
gactacaactcaattcatgtaattgaaaaacgcgccatgcctgaattcttcaacagcaag
aacaaatcgaagacaccagagatttacatggcttatcgcaatttcatgattgacacctat
aggctaaatccaactgaatacttgacgagtaccgcttgtcgccgtaacttggctggcgat
gtgtgcgccataatgcgagtgcatgcatttttggagcagtggggtctaatcaattaccag
attgatgccgatctgcgtccaacgcctatgggcccgccgcccacttcgcacttccacata
ctgtcggatacaccatcaggcttgcaggcgattaatccgcagaagacacaacagccatcg
gcagccaagacactacttgatcttgacaagaaaccgctgggcaaggaaggtggcgtggat
tgcgataaaggcagcggtggtgcgttgggcattaagacggagacactggaaaacggtgca
gccagtgggttggcctctggagtcagccagtttggtctgaagctggatcagtatgccaaa
aagccggcggccatgaagaatcgtacggcggcgagcatgtcgcgggagtggaccgatcag
gagacgctgctcctactcgagggtctcgagatgcacaaggacgactggaacaaggtgtgc
gagcatgtgggtactcgcacccaggacgaatgcattttgcacttcttgcgtctgcctatc
gaggatccgtacctggaagacgatggcggctttttgggaccgctcggctgccagccaatt
ccatttagcaagtctggcaatccaattatgtcgacagtggcattcttggcatccgtggtg
gacccacgtgttgcggctgctgctgcgaaggctgctatggaggaattcgctgccatcaag
gacgaggtgcccgctaccataatggacaaccatatgaaaaacgtggagaaggcttcgtct
gggggcaaattcaatcccaactttggtctggcgaatagcggcattgctggcacagggaac
gacaaggacgatgatgaatcaaaggagggcaacaacaccagctccactgcagccggcaac
gatgaagatgcaaaagatgttaacaaaaaagacgacgatgcaaagtctaaagacaaaacg
aaatcggataagctcggcaccgccacagactcgagttccacatcagcaacatcgtcaaca
acaacaacaccaactacaacaacagcaggagccgcagcagcagccacatcaaatagcaca
gacaaaaagtcgaaagattcgtcgccgtcgtcggccgcagccgacaaaatcaataaaacc
gacaagacgggcaagacggcttccaactcctcacccacagagactggagcgagcaacgat
attgagatcaagaccgaggataacagtggagacggcgagacgaaggatggtagcaacgat
gccagtagtggtggtgctcctgccaaggatggagctttcagcgagaacaatatgcaaacg
gcagctgcggccgccttggcatcggcagctgtcaaagcgaaacatttggcagcgctggaa
gagcgcaagatcaagtcactggtggcgctgttggtggagacacagatgaagaagctggaa
attaagctgcggcatttcgaggagctggaggccaccatggagcgggagcgtgagggcctt
gaatatcagcgacagcagctcattacggagcgtcaacaatttcaccttgagcagctgaag
gcggccgagtttcgagcgcgccaacaggcgcatcaccgtctgcagcaggagctgcagcaa
cagggccaggtgggtgccgctgtaggtgccatggcgatgccaccacagcagcagcagcag
caacaacaacagacgctaccgccgcctccgcatcaacagcatgctcaacaacagcagccg
cagcaacagcatccacttcagccaccgccaccgcagcagctgggagcgcctgcggtgcag
catcaaccgttgccgtcacacgtggctgcagccgcaccaccaaatggtgcaccgttcaca
gcaccgacagctgtcgttccggcggccacagcgccgccaacaccaccaggcgaacttcct
gcaccaagcactcaagcgccgacgccaatggacactacgccgccagctagtgcaccacct
gttgccgaagccgccagcgtggcagcagttgcgcccagctcagcgcctgctccgagcatt
cctgcggcaagcgtcgctgctgctaatcctcctcctccttcatcttaa
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