Drosophila arizonae: 108615236
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Entry
108615236 CDS
T05886
Name
(RefSeq) uncharacterized protein LOC108615236 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
daz
Drosophila arizonae
Pathway
daz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108615236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
daz03036
]
108615236
Chromosome and associated proteins [BR:
daz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108615236
REST complex
108615236
Heterochromatin formation proteins
Other heterochromatin formation proteins
108615236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
108615236
NCBI-ProteinID:
XP_017865068
LinkDB
All DBs
Position
5
AA seq
2120 aa
AA seq
DB search
MMKRTRIDEVQFGTRSGPGPGGGGGANSGTTSVGVNTAGGVTIGTVVPNAHSATISGIGS
IHHRILTPQHGGAQTIAYLPSTTPTATNLKTTSSIVDSASTQTNVTGVGGPGSGGVVVST
GSAGTQTLQYTTSYSVASIQAGGTMKASTGDGNAVQIHVTGGGAAVSAAAGGAVGGGSQT
VSSSCQTGSIRQRTISGTQTNSTSSLTTTAQQTQPSAQLSTPPNGPGVAAGAGAVSVGAG
NSTPPQGQAAAAGGATSAAPRLKVEDALSYLDQVKYQYADQPQIYNNFLDIMKEFKSHCI
DTPGVIERVSTLFKGHTELIYGFNMFLPPGYKIEIHSDALGCSVPVVSMPSPPGAPSSTG
TVHMIAAAGNSPLASSVNAHTTLKPIAQAQGPGGPGAVGGAGAGGGGAATAAAATVAQIQ
TPVNLMTHGGASLTQTTIHALQPAAAAAQSPGGHVHVTSSSAVPPSGVGVNVGVGVSPYV
PQNYSRDRADQRATITPTGPGQVPAAVSSTAGSSIAVGPPTPNSLSELSPHAGPAAQHNL
HHIQQAHQSILLGETTGQQNQPVEFNHAITYVNKIKNRFQSQPAKYKKFLEILHAYQKEQ
KVMKEGSSGSGLNQGKMLTEQEVYTQVAKLFGQDEDLLREFGQFLPDATNHQSSAAAAAA
AQYMSKSALHNDHHNKQQQQRTTTTATLSGGAHISMSSASPSAVPNSGSPMHLSSGATLS
QIDSSSAHAHAAAIGNLSAVNTSVSIKSCAVPQNHIISGSIFEKDYHGLGQQQLQQPQQQ
QQQQQPQRHPSLQPPHILSSTPPSSLRGSTVGVGAVLDQRNNHHAQKYVAQHSNMSQKKS
PSYGGIANIQHLPHLNDNSLDRNSPNIASYVTPAQQLPAHPHPHPHHNAHNSSSSSSSRR
QAVDELAAASVSSGFGTTGGNGPPPAKRPKPYCRDVSFSEASRKCTIADVAFFDKVRKAL
RSPQVYDNFLRCLTLFNQEIVSKTELLGLVSPFLMKFPDLLRWFTDFLGPPSSGQVGGAA
GAGGLIDGLPLAATQRQGSNSSSHDRASSHQSTDYVQDVDLSLCKRLGASYCALPQSTVP
KKCSGRTALCREVLNDKWVSFPTWASEDSTFVTSRKTQFEETIYRNIHRTEDERFELDLV
IEVNSTTIRVLENVQKKMSRMSPEELAKFHLDDHLGGTSQTIHQRAIHRIYGDKSGEIIQ
GLKKNPSVAVPIVLKRLKVKEEEWRDAQKNFNKQWREQNEKYYLKSLDHQAINFKPNDMK
ALRSKSLFNEIETLYDERHDAEDDSMEAAGPHLVLPYKDKTILDDAANLLIHHVKRQTGI
QKQEKQKIKQIIRQFVPDLFFAPRQPLSDDERDDAFPFLVDDTKMEVDSPVSRVAPKGGG
AGGGGGGGGGGGGESASPARSNVSSSSSVPGGASGSASAAAGAAVTAVTAIKKESESESS
SKTSTATTTADDATPSTSSAAAAAAAVGDIKEKSEVDAAQRAVGGRDEETAAKAANNNSN
SSPRRSEEAAAAAAAGADVSVKLEQSDCANPTILPPHAQGQREDESYSLFFANNNWYLFL
RLHAILCDRLHVMYERARLLAIEEERSRVNRRESTATALRLKPKPDVQVEDYYPTFLDML
KNVLDGNMDSNTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELYAS
EQRRNSTGGYCRDAHKSYEREMSYQRKAESILNEENCFKVFIYKIDCRVTIELLDSEPEE
VEKPAVLKAQKFSKYVERLANPALGAGSGNNNNNSSSNNNNNNNSNQSAGNDNLVETSGI
KTEEAEEIAELVRGSRKARFLLRNKRRSQLHEEQVRQLFEQKRSCSGLESNAVPSEATPN
ANNNNNNNNNWSKQRAPERLGTPQVGLAEQYAFNDRDEISTNTSNGRCFVTSKNLNLLKY
DAVRRAKKSHCRVTQAKYSRFQSYVNRWLQQHVSEQLQQHCNDWLLGKTPEQINASGWGA
TSKTKSLQQKDTTKTPYRIYTRYKVLQPSSGVTTTVAAGLAPATAISTVAATAQAAPTPA
TVAAAVTVTPAVNNANASSGSSSSNILTVSLTKTSSTAAAATTTTATSQQHCNSAAAAAA
AAATAGNAETTLQQVRPMES
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgcacgcgcatcgatgaagtccaatttggcacacgttccggtccagggccg
ggcggtggcggtggtgcgaacagtggcaccaccagcgtgggcgttaatacagccggcggc
gttaccattggcactgtggtgccaaatgcccacagcgccacaatcagcggcattggctcc
atacaccatcgcatattgacgccgcagcatggaggcgcacagaccatagcctatctgccg
tccacgacgccgacggcaacgaatctgaaaacaacgagcagcattgtcgatagcgccagc
acccaaacgaacgtgacgggcgtcggtggcccgggcagtggaggcgttgtcgtctccacg
ggcagtgcgggcacccaaaccttgcagtataccacatcttatagcgttgcctccatccaa
gcgggcggcactatgaaggccagcacaggggacggcaacgcggtgcagatacatgtgact
ggcggcggtgctgcagtatccgcagcagctggcggagcagttggtggtggctctcagaca
gtatccagcagctgtcaaacgggcagcattcgacagcgcacaataagcggaactcagaca
aattccacaagcagcctgacaacaacagcgcaacaaacacaaccatccgcacagttgtcc
acaccgcccaatggaccgggtgtggcagctggcgcaggagcggtctctgtgggtgcggga
aacagcacgccgccccagggacaggcagcggcagctggtggcgccaccagtgctgcgccg
cgactcaaggtcgaggatgcgctgagctatctggatcaggttaaataccaatatgccgat
cagccgcagatctacaacaatttcctggacattatgaaggagttcaaatcgcattgcatc
gatacaccgggtgtgattgagcgtgtctcgacgctcttcaagggccacactgagctgatc
tatggcttcaatatgttcttgccgcccggctataagattgaaatccattccgatgcactt
ggctgctcagttccagttgtctcgatgccatcgccacctggagcacccagcagcacgggc
acagttcatatgattgccgcagcgggcaacagcccgttggcgagcagcgtgaatgcgcat
acaacactgaagccgattgcgcaagcccagggtccaggtggtcctggtgccgtcggtggt
gctggcgctggcggtggtggtgcagctacagcagccgctgcgactgtagcgcagatccag
acgcctgtcaatttgatgacgcatggtggcgcctcactcacccagaccacgatacatgcc
ctgcagccggcagcagctgcagctcagtcgcccggtgggcatgtccatgtgaccagtagc
tcagcggtgccaccgagcggcgttggtgtcaatgtgggcgtcggtgtgtcgccctatgtg
ccacaaaactattcacgggatcgggccgatcaacgtgcaacgataacgcccacgggccct
ggtcaggtgccggcggccgtgtcatcaacggctggctccagcattgcggtcggcccgccg
actcccaattcattgagtgagctaagtccacacgccggacccgctgcccagcacaatttg
catcacatccagcaggcgcatcagtccattttgctgggcgagacgacgggccagcagaat
cagccggtggagttcaatcacgctataacatatgtgaataagattaagaatcgattccaa
agccagccggcgaagtataagaaattcctggaaatcctgcacgcctatcagaaggagcag
aaggtgatgaaggagggcagcagcggcagtggcttgaatcagggcaaaatgctaaccgaa
caggaggtctacacgcaggtcgccaaactctttggccaggatgaggatctgttacgtgaa
tttggccaatttctgccggatgccacaaatcatcaatcgtccgctgccgctgccgccgct
gcacaatacatgtccaagtcagcgctgcacaacgatcatcacaacaagcagcagcagcag
cgcaccacaacgacggcyacattgagcggtggtgcgcacatcagcatgtcctcggcgtcg
ccgtcggcggtgcctaacagtggttcgcccatgcatttgagcagcggtgcgacgctctcg
cagatcgacagcagcagcgcgcacgcgcatgccgcagccattggcaatctgtcggctgtg
aatacgagcgtcagcatcaagtcctgtgccgtgccacagaatcatataatcagcggcagc
attttcgagaaggactatcatggactaggacaacagcagctgcagcagccgcaacagcag
caacaacagcaacaaccgcagcgacatccgagcctgcagccaccgcacatactctccagc
acgccgccgagtagcctgcggggcagcactgtgggcgtgggcgccgtgctggaccagcgc
aacaatcatcatgcccagaagtatgtggcccagcactcgaacatgtcgcagaagaagtcg
cccagctatggcgggatagccaacattcagcatctgccgcatctcaatgacaattcgctc
gatcgcaactcgccgaacattgccagctatgtgacgcccgctcagcagctgcctgcacat
ccgcatccccatccgcaccacaatgcgcacaactcgagcagcagcagcagcagccggcgg
caggcggtggatgagctggcggcggcctccgtttccagtggctttggcacaaccggaggc
aacggaccaccgccggcgaagcggccaaagccctattgtcgggacgtcagtttctcggaa
gcatcgcgtaagtgtaccatcgcggatgtggccttctttgataaggtgcgtaaggcgcta
cgcagtccgcaggtctacgacaatttcctgcgctgtctgacgctctttaatcaggagatt
gtctcgaagacggaactgctgggccttgtctcgccgttcctcatgaaatttccggatctg
ttgcgttggtttacagactttctcggcccgccgtcgtccggccaggtgggcggtgcagct
ggcgctggcggactcatcgacggtctgcctttagcggccacacagcgtcagggcagcaat
agcagctcccatgatcgggcgagcagtcatcagagcacggactatgtccaggatgttgat
ctgtcactgtgcaaacgcctgggcgcctcgtattgcgccctaccccaatccacggtgccc
aagaagtgcagtggacgcaccgccctctgtcgcgaggtgctcaacgacaagtgggtctcg
tttccgacatgggccagcgaggactcgacatttgtcacctcgcggaagacccagttcgag
gagaccatctacaggaatattcacagaacggaagacgagcgcttcgaactggatctggtg
attgaggtgaacagcaccacgattcgtgtcctggagaatgtacaaaagaaaatgtctcgc
atgtcgcccgaggagttggccaaatttcatttggacgatcatctcggtggcacctcacaa
accatccaccagcgggccatacatcgcatttatggcgacaagtccggcgagataatccaa
ggcttgaaaaagaatccctcagtggctgtgcccattgtcctcaagcgacttaaggtcaag
gaggaggaatggcgggatgcacaaaagaacttcaataagcaatggcgcgaacagaatgag
aaatattatttgaaatctctggatcatcaggcaatcaatttcaagcccaatgatatgaag
gcattgcgctcgaagagtctcttcaatgagattgagacgctgtacgatgagcgccacgac
gcggaagacgattccatggaagcggcggggccgcatctggtgctgccgtacaaggacaag
accatactggacgatgcggccaatctgctgatacatcatgtcaagcgtcagacgggcatc
cagaagcaggagaagcagaaaatcaaacagatcatacgacaatttgtgcctgacctattc
tttgcgccacgacagccgctgagcgacgatgaacgcgatgacgcatttccatttttggta
gatgacactaaaatggaagtcgactcgcctgtgagtcgtgttgcgcccaaaggtggagga
gcgggcggaggtggaggcggaggtggaggcggaggcggagagagcgcctcaccagctcgc
agtaatgtgagcagcagcagcagcgttcccggtggagccagtggatcagcgtcagctgca
gcaggagcagccgtaacagctgtgacagccatcaaaaaggagtctgagtcagagtcgtcg
agcaaaacgtcaacagcaacaacaacggccgatgatgcaacgccgtcgacttcatcagct
gcggcggcggcagcagcagttggcgacattaaggaaaagtctgaagtagatgcggcgcaa
agagctgtcggaggaagagacgaggagacggcagccaaggcagctaataataatagtaat
agcagtcccaggcgaagcgaagaggcagcagcggcggcggcagcgggcgccgatgtgagc
gtgaagctggagcagagcgattgtgcgaatcccacgattctgccaccgcatgcgcagggt
cagcgagaggatgagtcgtattccctattctttgccaacaacaactggtacctgttcctg
cgactgcacgccatcctctgtgatcgactgcacgtcatgtacgagcgtgcgcgcctgctg
gccattgaggaggagcgcagccgtgtgaatcgaagggagagcacggcgacagcactgaga
ttgaaacccaagccggatgtgcaagtggaggactattatcccacgtttctggatatgctg
aagaatgtgctcgatggcaacatggactcgaataccttcgaagataccatgcgtgaaatg
tttggcatctatgcctacatatcctttacgctcgataaggttgtttccaatgctgtccga
cagctgcaatactgcgtcacggagcgcgccgccttggactgtgtggagctctatgccagc
gaacagaggcgcaacagcaccggaggctactgtcgcgatgcacacaagagctacgagcga
gagatgagctaccagcgcaaggcggagagcatactcaacgaggagaactgcttcaaagtg
tttatttacaagatcgattgtcgtgtgaccattgagctgctcgactcggaaccggaggag
gtggaaaagccggctgtattaaaggcgcaaaagtttagcaaatatgtggagcgtttagca
aatcccgctttgggcgccggcagcggcaacaacaataacaacagcagcagcaacaacaac
aacaataacaacagcaatcaatctgcaggcaatgacaatctggtggaaacgtccggcatc
aaaacggaggaagcagaggagatcgccgagctggtgcgcggttcacgcaaagcacgtttt
ctgctgcggaacaagcgacgctcgcagctgcatgaggaacaggtgcgtcaactctttgaa
cagaagcgcagttgcagtggactcgaatcgaatgctgtgcccagtgaagcaacacccaat
gccaacaacaacaacaacaataacaacaattggagcaagcaacgggcacctgaacgcttg
ggtacgccacaggtgggcctggcagagcaatatgcattcaacgatcgcgacgagatcagc
acaaatacgagcaacggccgctgctttgtgaccagcaagaatctcaatttactcaaatac
gatgcagtgcgtcgtgccaagaagagtcattgccgcgtcacacaagccaagtactcgcgt
ttccagagctacgtcaatagatggctgcagcagcatgtcagcgaacaactgcagcagcat
tgcaatgactggctgcttggcaagacgcccgaacagatcaatgccagtggctggggtgcc
accagcaaaacgaagtcgctgcagcaaaaggatacgacaaagacgccttatcgcatctat
acgcgctacaaggtgttgcagcccagcagcggcgtgacaacaactgttgctgcgggacta
gcaccagcgacagcaatatcaacagttgcggcgacagctcaagctgccccaacaccagca
acagttgccgctgctgtcacagttacaccggctgttaacaatgctaacgccagcagcggc
agtagcagcagcaacattttgaccgtgagcttaacaaaaacatcgtcaacagcagctgca
gcaacaacaacaacagctacttcgcaacaacattgcaacagcgccgcagcagcagcagca
gccgctgccacagcgggcaatgcagagacaacactgcaacaagttcggccaatggagagc
taa
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