KEGG   Drosophila arizonae: 108615616
Entry
108615616         CDS       T05886                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
daz  Drosophila arizonae
Pathway
daz03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108615616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daz03019]
    108615616
Enzymes [BR:daz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     108615616
Messenger RNA biogenesis [BR:daz03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     108615616
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N MMR_HSR1 AAA_16 AAA_18 AAA_22 nSTAND3 TniB ATP_bind_1 CbiA GTP_EFTU AAA_29
Other DBs
NCBI-GeneID: 108615616
NCBI-ProteinID: XP_017865733
LinkDB
Position
5
AA seq 425 aa
MSEDNNNDREYILDADSELRFEIEQKDAKVFVTLISGFAELFGTELVKKKKYEFGIGAKV
AIFTYQGCVLQVTGKMDVCYISKETPMIQYMNCHAALEQFRTDAEEHDKRGPVILVVGPM
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAISIPGNIATILIERPASVEEGFAKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLDANKRTKSSGIIVNTCGWVKGYGYKHLL
HAARAYRARAIFVLDQERLYNDLLRDVPSNVHVVLLPKSGGVVERTKELRHESREQRIKE
YFYGNMRTPFYPFSFEVKFQDLRLYKIGAPPLPDSCMPIGMKAEDNKKKVVAVTPTSSLL
HHILTLSFAESTDENVIGTNVAGFCCVTEVDMERQSVMLLSPQPRPLPPNALLLWSELQF
MDNHA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtcagaagataataataatgatagagaatatatattggatgcagactctgagctgcga
ttcgaaatcgagcaaaaagatgccaaagtgttcgtgacgctcatctctgggtttgcagaa
ctctttggtaccgaattagtaaagaaaaagaaatatgaattcggaataggagcaaaagtg
gctatatttacctaccaaggctgcgtgctgcaagtaacgggcaaaatggatgtatgttat
atttctaaagagacaccaatgatacaatatatgaactgtcatgcagcattggaacaattt
cgtaccgatgccgaagaacacgataaacggggcccagttattctagtagtagggcccatg
gacgtgggcaagagtaccctctgtcgcattctgttgaactatgcagtacgagtaggccga
agaccgctttatgcagatctcgatgtgggccaaggtgccatttcaatccctggcaatata
gccactattctcattgaacgaccagccagtgtcgaagaaggatttgcgaaaacagcgcct
ttagtttaccactttggtcacaaatctcctagtggcaacagcgtgctctacaacgctgta
gtatcgaaaatggcggaagtaacactgcaatcgttagacgccaacaaacgaaccaaaagc
tcaggcatcattgttaacacgtgtggttgggttaagggctacggctataagcacttgctg
catgcagcccgagcttatcgcgctcgtgccatttttgtattagaccaggagcgtttgtac
aatgacctgttgcgggatgtaccgagcaacgttcatgtagtcctcttgccaaaaagtggc
ggcgtggtagagcgcactaaagaattacggcatgaatcgcgcgagcaacgtataaaggaa
tatttctatggcaatatgcgtacacctttttatccattttcgttcgaagtcaaatttcaa
gatctacgtctttacaaaattggcgctcccccattgcctgattcctgcatgcccattggt
atgaaagcggaagataacaaaaaaaaagttgtagcggttacaccgacgtcatctctacta
catcacattctcacgctaagctttgcagaatctacggacgaaaatgtcattggcactaat
gttgctgggttttgttgcgttactgaggtggacatggagcgacaatctgtaatgctgctc
tctccacagccacgtcctttgccgccgaacgcattgttattgtggtctgaattacagttt
atggacaatcatgcctaa

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