Drosophila arizonae: 108616711
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Entry
108616711 CDS
T05886
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
daz
Drosophila arizonae
Pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108616711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108616711
Spliceosome [BR:
daz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108616711
Complex C
U5 SnRNP specific factors
108616711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
108616711
NCBI-ProteinID:
XP_017867609
UniProt:
A0ABM1PK73
LinkDB
All DBs
Position
5
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPPNAWAAQLMAQQQAYAAAHAQQAQLHAQHQMANQIQQIPPPGAPLPPAGHA
NGIPVPAQGVPQPQLGQIPTPKPDILTEEKLQEKALKWQHLQSKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDSDEDNAVYKWFYDHRPLVDTPFVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNANSKIQEPMPDDDEDFTLPDDVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQDVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDAVT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNALPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccgccgtatatgataccgccaaatgcttgggccgcccaactgatggcccag
cagcaggcatatgcggcggcccatgcacagcaggcacagctgcatgcccagcatcagatg
gccaaccagatacagcaaatacccccaccgggggctccattgccccctgcgggtcatgcc
aatggcattccagtaccggcacagggagtgcctcagccccagctaggtcagatacctact
ccaaagccggatattctgaccgaagaaaaactgcaggagaaggcgctcaagtggcagcat
ttgcagtctaagcgatttgctgaaaaacgcaaattcggttttgttgatacacagaaagag
gatatgccgccggaacatatacggaaaatcatacgtgatcacggtgatatgacctctcgc
aaatatcgccatgataagcgtgtctatctgggcgcactcaaatatatgccacatgcagtg
ctgaagctgctcgagaatatgcctatgccctgggagcaaataagagatgtgcaggtgctg
taccacataacaggcgccattacctttgtcaatgaaattccctgggtaattgagcccgtc
tacatagcacaatggggcacaatgtggattatgatgcgtcgcgaaaagcgcgatcgtcgt
cattttaagcgcatgcgtttcccgccctttgacgacgaggagccgccattggactacgca
gacaacgtgctggatgtagagcccctggaggccatacaaatcgagctggacagcgatgaa
gataatgctgtatacaaatggttctacgatcatagaccattagtcgatacaccctttgta
aatggatcaacttaccgcaaatggaatctgtcgttgccacagctggctacgctttatcgt
ctggcaaatcagttgctcaccgacttggttgacaataatttcttttatctgtttgatcca
aagagcttctttacggccaaagcactcaacatggccatacctggagggcccaagtttgag
ccacttatcaaagatcataatgttggtgacgaggactggaatgagttcaatgacattaat
aaagttattattagacaacccatacgaacggagtatcgcattgcatttccatatctatac
aacaatatgccacattttgtgcatctcagctggtatcacactccaaacgttgtctacatc
aagaccgaggatcctgatttgcctgcgttttactttgatcctttaatcaatcccatttcg
catcgtaatgctaattccaagatccaggagcccatgccagacgatgatgaggattttaca
ttgcccgatgatgtgcagccctttctgcaggacacgcccctctatacagacaatacagcc
aatggcattgcgctgttgtgggcaccgcgtcccttcaatatgcgctcgggtcgctcacgt
cgtgcaattgatgtgccgctggtcaagtgctggtacaaggaacattgtccacctggtcat
ccggtcaaggtgcgcgtcagctatcagaagctgctcaaatactatgtgcttaatgcattg
aagcatcgcaagccgaagccgcaaaagaagcgctatttgttccgttcattcaaggccacc
aagttcttccaaaccaccaccttggattgggttgaggctggcttgcaggtgtgtcgccag
ggctataatatgctcaatctgcttattcatcgcaagaatcttaactacctgcatttggac
tacaactttaacttgaagccggttaagaccttgaccacgaaggagcgtaaaaagtcgcgt
ttcggcaatgctttccatttgtgccgtgagattttgcgtctgactaaactgatcattgac
tcacatgtacagtatcgcctcaataacgtggacgcttttcagctagctgacggtctgcag
tatatctttgcccatgtgggccagctgacgggcatgtatcgctacaaatacaaactgatg
cggcagatacggatgtgcaaggatttgaagcatttaatctactatcgcttcaatacggga
cccgtaggcaagggtcctggctgtggcttctgggcgcctggctggcgtgtttggctgttc
tttatgcgtggcatcactccgctgctcgaacgctggctgggcaatctgttgtcccgtcaa
tttgagggtcgtcattcgaagggcgtggccaagacggtgaccaaacaacgtgttgaatcc
catttcgacttggagttgcgtgcctcagttatgcacgatattgtggacatgatgcccgag
ggtattaagcaaaacaaggcgcgtactatactccagcatttgtccgaggcttggcgctgc
tggaaggccaacataccgtggaaggtgcccggtctgcccatacccatagagaacatgata
ttgcgttatgtgaaaatgaaagccgattggtggacgaacacggcgcactacaatcgtgag
cgcatacgtcgtggtgccactgtcgataagactgtctgcaaaaagaatttgggtcgattg
acgcgtttgtatttgaaggcggagcaggagcggcagcataattacctcaaggatggtcct
tatatatcgcccgaggaggcggtggccatatataccacaacggtgcattggctggaatcg
cgtcgctttgcgcccataccctttcccccgttgtcctataagcacgacactaagctgctg
attttggccttggagcgtctgaaggaagcgtacagcgtaaagtcgcgcttgaatcaaagc
cagcgcgaggagctgggtctgattgagcaggcctacgataacccgcacgaagcgttgtcc
cgtatcaaacgtcatctgttgacacaacgcgccttcaaggaggtgggaattgaattcatg
gacctgtacagccacttaatacctgtttacgaagtggagcctttggagaagatcaccgac
gcctatttggatcagtatctgtggtatgaggcagacaagcgtagactattcccgccatgg
atcaagcccagcgacacggagcctccaccgctattagcctacaaatggtgtcaaggcatc
aacaatttgcaggatgtctgggacgtcggtgagggcgaatgcaacgtgctgctcgaatca
cgctttgagaagctttacgagaagattgatttgactttgctcaatcgtctgctgcgtctc
attgtggatcacaatatcgccgattatatgacagccaagaacaacgtcgttattaactac
aaggacatgaatcatacgaacagttatggcattatacgcggcttacaattctcttcgttc
atcacacagtactatggacttgttttggatctgttggtgctgggtctgcatcgctccagc
gaaatggccggaccacctcaaatgcccaacgacttcctaacattccaggatgcagttaca
gaaacagcgcatcccatccgactttactgtcgctacgtggatcgtatacatttgttcttc
agattttcggctgaggaagcgcgcgaccttattcagcgttatctgaccgaacatccagat
ccgaataatgagaatatcgtgggctataataacaaaaaatgctggccacgcgatgcgaga
atgcgtttgatgaagcacgatgttaatttgggtcgcgctgtgttttgggacatcaagaac
cgtttgcctcgctctgtaactaccattggctgggagagcactttcgtctcagtctattcc
aaggataatcccaatctgctattcaacatgagcggcttcgagtgtcgcattctgccaaag
tgtcgcacgcaaaatgaggagtttacgcatcgtgatggcgtttggaatttgcagaatgag
ataacaaaggagcgcacggctcagtgtttcctgcgcgtcgatgatgagtcgctgggacgt
ttccataatcgtgtgcgacaaattttaatggcctccggctccaccacattcacaaagatt
gtcaacaaatggaacacggctttaattggtctaatgacctatttccgcgaggcggttgtg
aatacgcaggagctgctcgatttgctggttaagtgtgaaaataagatacaaacgcgtatt
aagattggcttgaattccaaaatgccttcgcgtttcccgcccgtggtgttctatacgccc
aaggagctgggcggcttgggcatgttgagcatgggtcacgtgctgataccgcaatcagat
ctgcgctggtccaagcagaccgacgtgggcattacgcatttccgctccggcatgtcgcat
gacgaggatcagcttataccaaatctgtatcgttatatacagccgtgggagagtgaattc
attgactcgcagcgtgtttgggctgagtatgcgctgaagagacaggaagcaaatgcacag
aatcgtcgcctgacgctggaggatctggaggatagctgggatcgtggtataccgcgtatc
aatacgctcttccagaaggatcgtcacacgctggcttacgacaagggctggcgcattcgc
actgagttcaaacagtatcaggttctcaagcagaatcccttctggtggacgcatcagcga
cacgatggcaaattgtggaatctgaacaactatcgcacagacatgatccaagcgctgggc
ggtgtggaaggcatcttggagcatacgctattcaagggcacctacttcccaacgtgggag
ggtctgttctgggagaaggcatccggctttgaggagtccatgaagtacaagaagctgaca
aatgctcagcgctctggtcttaatcagatacccaatcgtcggttcacgctatggtggtca
ccgactatcaatcgtgccaacgtttacgtcggtttccaggtgcagctggatctgacgggc
attttcatgcacggcaaaattcccacactgaaaatctcgctgattcaaatcttccgtgct
cacttgtggcaaaagatacacgaatcgattgtcatggatttgtgtcaagtgttcgatcag
gagctggacgcccttgagattgagacggtgcaaaaggagacgatacatccgcgtaaatca
tataaaatgaattcctcatgtgccgacatactgctgttccctgcctacaaatggaacgtg
tcccgaccatcgctgctagcagacaccaaggacaccatggacaatacaacaacacagaaa
tattggctggatatacagctgcgttggggtgattacgattcgcacgacgtggagcgttat
gcaagggcaaagttcctggactacaccacggataacatgtccatttatccgtcgccgacg
ggcgtgctcattgccatcgatttggcttacaatttgcattcggcctacggcaattggttc
ccgggctgcaagactctgatccaacaggccatggccaagatcatgaaggccaatccggcg
ctttatgtgctgcgcgagcgtatacgcaaggccttgcaactgtactcatcggagcccacg
gagccgtaccttagctcacagaattatggcgagctcttctcgaatcaaatcatttggttt
gtggacgatacgaatgtctatcgcgtcaccatccacaagacctttgagggtaatttgacc
acgaaacccatcaatggcgccatcttcatcttcaatccacgtactggacagctgttcctg
aagatcatccacacgtccgtgtgggcgggtcagaagcgtttgggccagctggccaaatgg
aagacggccgaggaagttgctgccctgattcgttcgctgcccgttgaggagcagccgaag
cagattattgtcacacgcaaaggcatgttggatccgcttgaggtgcatttacttgacttc
cccaacattgtcatcaagggctcggagttgcagctgcccttccaggcctgcctcaaggtg
gagaagtttggtgacttgattctgaaagccaccgagccacaaatggtgttgttcaatctg
tacgatgactggctaaagacgatatcttcatatacggcattcagtcgtttgatattgata
ctgcgcgccctgcacgtgaatacggaacggacgaagatcatactgaagccggataagaca
accataacggaggcgcatcacatttggcccacgctaacggacgaggaatggatcaaggtg
gaggtgcagctgaaggatctcattctggccgattatggcaagaagaacaacgtgaacgtt
gcctcgctgacacagtccgagattcgtgacatcattctgggcatggagatcagtgcaccg
tccgcacagcgtcaacagatagccgagatcgagaaacagaccaaggaacagaatcaattg
acggccaccacgacgcgcacaacgaacaagcacggagatgagattatcacgtcaaccacc
tcgaactatgagacgcaaacgtttagctcgaagaccgaatggcgcgtgcgtgcgatatcc
gcaacgaatctgcacttgcgtacgaatcacatctatgtcagctctgacgatatcaaggaa
acgggctatacgtatattttgccaaagaatatattgaagaagttcgtcacgatatccgat
ttgcgtgcacagatcgctggctatttgtacggtgtgagtccgccggataatccgcaggtg
aaggagatacgctgcattgtgatgccgccgcagtggggcacacatcagacgatcaatttg
ccgaatgccctgcccacgcatcagtatctgaaggacatggagccacttggctggattcac
acgcaaccgaatgaactgccgcagttgtcgccgcaggacatcaccacccatgccaagatc
atgcaggagaactccaattgggatggcgagaagacaattgtcattacctgctccttcacg
cccggctcctgctccctgacggcctacaagctgacaccgtccggcttcgaatggggctcc
aagaacacggacaagggcaataatcccaagggatatctgccatcgcactacgaacgcgtt
caaatgctgctgtccaataagttcctcggattcttcatggtgccggcgcagagcagttgg
aactacaacttcatgggcgtgcgacacgatccgaatatgaaatacgaactgcaattggcc
aacccgaaggagttctatcacgaactgcatcgcacatcgcatttcctgctcttctccaat
ctggaggatggcggcgatggtgccggcgctgatcgggaggatgtctatgcctaa
DBGET
integrated database retrieval system
