Drosophila arizonae: 108617193
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Entry
108617193 CDS
T05886
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108617193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108617193
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108617193
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108617193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
108617193
NCBI-ProteinID:
XP_017868397
LinkDB
All DBs
Position
5
AA seq
300 aa
AA seq
DB search
MSTNAMIDLALDRVDWTALADNQEQLPRIYTPGEVLMPEAGFMRGHGTFVEDENIKASVA
GVIEKVNKLISVRPLKSRYVGEIGDVVVARVLEVGQKRWRVDTNSRLDSLLLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNVFEEGTLSLYTRSLKYGKLSQGILVKVFPA
LVKRRKMHFHNLPCGASVILGNNGYIWISPTKTDDQVGGEGGFAQNLTEVVPRNEREVIA
RLRNCILALAKCKLMLYDTSIQYAYEESLKYESRELLQQHVIFDIGEQTQARLRDVDLMD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaatgcaatgatagacctggcgctggaccgcgttgattggactgcattggcc
gataaccaagagcaactgcctcgtatttatacgcctggcgaggtgctgatgccggaagca
ggctttatgcgcggccatggcaccttcgtggaagacgaaaacataaaagcctcagtggca
ggtgtgattgagaaggtgaacaaattgatatcagtccgaccgcttaagagtcgatatgtg
ggcgagatcggcgatgtggtagttgcacgtgtactcgaagtgggtcaaaaacgttggcga
gtcgacacaaattcacgtttggactcattgctgctgctttcttcagtaaatctaccaggc
ggcgagctaaggcggaggtcggcagaggatgaacaaatgatgagacgttatctggacgaa
ggggatttgatatccgcagaagtgcagaacgtctttgaggagggcacattgtcgctatac
acccgcagcttaaaatatggcaaactttcccagggcatactggtcaaggttttcccagcg
cttgtcaaacggcgaaagatgcattttcataatctgccatgtggtgcgtccgtcattctt
ggcaacaatggctacatctggatatcgcccacaaagaccgacgatcaggtcggcggcgag
ggtggcttcgcccagaacttgacggaagtggtgccacgcaacgaacgcgaggttatagca
cgcctgcgcaactgcatcctggcactggccaagtgtaaactgatgttatacgatacaagc
attcaatacgcctacgaggagtcgctgaaatacgaatcccgtgagctactccagcagcat
gtaatcttcgatattggcgagcagacgcaggctcggctcagagatgtagatctcatggat
tga
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