KEGG   Drosophila arizonae: 108617193
Entry
108617193         CDS       T05886                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
daz  Drosophila arizonae
Pathway
daz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108617193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daz03019]
    108617193
Messenger RNA biogenesis [BR:daz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108617193
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108617193
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N
Other DBs
NCBI-GeneID: 108617193
NCBI-ProteinID: XP_017868397
LinkDB
Position
5
AA seq 300 aa
MSTNAMIDLALDRVDWTALADNQEQLPRIYTPGEVLMPEAGFMRGHGTFVEDENIKASVA
GVIEKVNKLISVRPLKSRYVGEIGDVVVARVLEVGQKRWRVDTNSRLDSLLLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNVFEEGTLSLYTRSLKYGKLSQGILVKVFPA
LVKRRKMHFHNLPCGASVILGNNGYIWISPTKTDDQVGGEGGFAQNLTEVVPRNEREVIA
RLRNCILALAKCKLMLYDTSIQYAYEESLKYESRELLQQHVIFDIGEQTQARLRDVDLMD
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtcaacaaatgcaatgatagacctggcgctggaccgcgttgattggactgcattggcc
gataaccaagagcaactgcctcgtatttatacgcctggcgaggtgctgatgccggaagca
ggctttatgcgcggccatggcaccttcgtggaagacgaaaacataaaagcctcagtggca
ggtgtgattgagaaggtgaacaaattgatatcagtccgaccgcttaagagtcgatatgtg
ggcgagatcggcgatgtggtagttgcacgtgtactcgaagtgggtcaaaaacgttggcga
gtcgacacaaattcacgtttggactcattgctgctgctttcttcagtaaatctaccaggc
ggcgagctaaggcggaggtcggcagaggatgaacaaatgatgagacgttatctggacgaa
ggggatttgatatccgcagaagtgcagaacgtctttgaggagggcacattgtcgctatac
acccgcagcttaaaatatggcaaactttcccagggcatactggtcaaggttttcccagcg
cttgtcaaacggcgaaagatgcattttcataatctgccatgtggtgcgtccgtcattctt
ggcaacaatggctacatctggatatcgcccacaaagaccgacgatcaggtcggcggcgag
ggtggcttcgcccagaacttgacggaagtggtgccacgcaacgaacgcgaggttatagca
cgcctgcgcaactgcatcctggcactggccaagtgtaaactgatgttatacgatacaagc
attcaatacgcctacgaggagtcgctgaaatacgaatcccgtgagctactccagcagcat
gtaatcttcgatattggcgagcagacgcaggctcggctcagagatgtagatctcatggat
tga

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