Drosophila arizonae: 108617391
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Entry
108617391 CDS
T05886
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108617391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108617391
03009 Ribosome biogenesis [BR:
daz03009
]
108617391
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108617391
Spliceosome [BR:
daz03041
]
Complex A
U2 snRNP components
U2 related factors
108617391
Complex B
108617391
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108617391
Ribosome biogenesis [BR:
daz03009
]
Eukaryotic type
90S particles
Helicases
108617391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
ResIII
ABC_tran
AAA_30
AAA_25
T2SSE
ATPase
AAA_7
TsaE
AAA_24
PhoH
Motif
Other DBs
NCBI-GeneID:
108617391
NCBI-ProteinID:
XP_017868670
LinkDB
All DBs
Position
5
AA seq
730 aa
AA seq
DB search
MSKRRIEVGETYSNKMKKESEASTSSAAASSTGTVAQVTGGFVPSKQPPITNPFTLKPYS
ARYQNLYKKRITLPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRK
GVACTQPRRVAAMSVAQRVSEEMDVNLGDEVGYSIRFEDCSSAKTLLKYMTDGMLLREAM
SDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDN
APLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHICEEIEGDILMFLTGQEEIEEAC
KRIKREIDNLGSEIGELKCIPLYSTLPPNQQQRIFEPPPPPNASGAIGRKVVVSTNIAET
SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT
EKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEA
KKVADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINYRSLKSADNVRQQLAR
IMDRFNLKRTSTEFASKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTC
LDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSLAPQYYDLENFPQCEAKRQLELLQQR
METKQYQKGF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacgtattgaagtgggcgagacatactccaacaagatgaagaaggagtcg
gaagcttcaacttcttcggcagcggcgtcatccaccggcactgttgcccaagtcacgggt
ggatttgtgcccagtaaacaaccacccattacaaatccgttcacattgaagccttactcc
gcacgctaccaaaacttgtacaagaagcgaatcacattgccggtattcgagtatcaggcg
gacttcatgcgcttgcttagccagcatcagtgtattgtattggtgggtgagacgggctct
ggtaaaacgacacaaatacctcaatggtgtgtggatttcgctgtgtccaaaggccgcaaa
ggtgtcgcctgtacacagccgcgtcgtgtggccgccatgtcggtggcccagcgtgtctct
gaggaaatggacgttaatcttggcgatgaggtcggctactccattcgattcgaggattgc
tcttcggccaagacacttctcaagtatatgacggacggtatgctgctgcgcgaagccatg
tcggatccgatgctcgatcaataccaggtcatattgcttgacgaggcgcacgagcgcacc
ctggccactgatattctgatgggtgtgctaaaagaggttattcgacagcgcaatgatctc
aaattggtggtcatgtcggccacactcgatgcaggcaaattccagcaatactttgacaat
gcgccgctgatgaacgtgcccggtcgcacgcatcccgtcgagattttctatacaccagag
cccgagagagactatttggaggcagctattcgcacagttatacaaatacacatatgcgag
gaaattgaaggcgatatacttatgtttctcacgggccaggaagagatcgaagaggcttgc
aagcgtatcaagcgtgagattgacaatttaggctctgaaattggcgagctgaagtgcatt
cccctttactcgactctgccgcccaatcaacaacagcgcatcttcgagccgcctccgcca
ccaaatgcctcaggtgctattggccgcaaggtggtcgtatccacaaacattgccgaaacc
tcgctgaccattgatggcgtggtttttgtgatcgatccgggctttgccaagcaaaaggta
tacaatccgcgcatacgtgtcgagagtttgctcgtctcccccatatcgaaggcctcggca
cagcagcgtgccggtcgtgctggtcgtacacggccaggcaagtgctttagactctatacg
gagaaggcattcaagaacgaaatgcaagacaacacctatccggagattttgcgctcgaat
ttgggcactgtggtgttgcagcttaagaaattgggcattgatgacttggtgcactttgat
ttcatggacccgccggcgcccgagactctgatgcgcgccttggagctgctcaactatttg
gccgccctcgacgacgacggcaatctgacggatctcggtgccgttatgtccgagtttccg
ctcgatccgcaattggctaagatgctgatagccagctgccagcacaattgctccaatgag
atactttcaattacggccatgctgtcggtgccacaatgtttcgtgcgacccaatgaggca
aagaaggtggctgacgaggcaaagatgcgtttcgctcacatcgacggagatcatctaacg
ctgctgaatgtctatcacgccttcaagcagagcagtgaggacccgaactggtgctatgag
aacttcatcaactatcgctcgctcaagagcgctgacaatgtgcgccagcagctggcacgc
atcatggatcgcttcaatttgaagcgcaccagcacagagttcgcctcgaaggactactat
gtgaatatacgcaaggctctagtccagggcttctttatgcaggtcgcgcatctggagcga
acgggacactatctgaccatcaaggacaaccagaacgtgcagctgcatccgtcaacttgc
ctggaccacaaacccgactgggtcatctacaacgaatttgtgctgaccaccaaaaactac
atacgcactgtgacagatgtgaagcctgaatggctgctcagtctggcgccacagtactac
gatctggaaaactttccacaatgcgaggccaagcggcagttggagctgcttcagcagcgc
atggagacgaagcagtaccagaagggcttctga
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integrated database retrieval system
