Drosophila arizonae: 108619208
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Entry
108619208 CDS
T05886
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
daz04040
]
108619208
Ion channels [BR:
daz04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108619208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
SieB
UPF0239
CFAP143
Motif
Other DBs
NCBI-GeneID:
108619208
NCBI-ProteinID:
XP_017871112
LinkDB
All DBs
Position
X
AA seq
1701 aa
AA seq
DB search
MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERKRAEGEVIRYDDEDEDE
GPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPYYSNVLTFVVVSKGKDIFRFSASK
AMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTF
ESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTV
AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSW
GNLTDENWDYHNRNISNWYSEDDGISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSF
DSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMS
YDELQKKAEEEEAAEEEAIREAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMA
KSPTYSCISYELFVGGEKGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRK
VSTTSLSLPGSPFNIRRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYAD
DSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTK
ESKLRNRNTRNQSVGASNGGTTCLDTNHKVEHRDYEIGLECTDEAGKIKHHDNPFIEPVQ
TQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKG
IDVFCVWDCCWVWLKFQEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLK
SGNYFFTATFAIEATMKLMAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSF
RLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKD
RFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVV
LNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTN
QISDQPSGERINQISWIWSEEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEF
TIHGDMKNNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHK
NRPFKDESHKGSAETMEGEEKRDASKEDLGLDEDLDEEGECEEGPLDGDIIIHANDEDIL
DEYPADCCPDSYYKKFPILAGDEDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSL
ALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVM
VSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLV
CLIFWLIFAIMGVQLFAGKYFKCEDLNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVG
NAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFI
GVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIV
TDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYH
YFIEPWNLFDVVVVILSILGK
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagattccgactcgatatctgaggaagaacgcagtttgttccgtccctttacc
cgcgaatcattggtgcaaattgaacaacgcattgccgctgaacatgaaaagcaaaaggag
ctggaaagaaagagagccgagggagaggtgatccgatatgatgacgaggacgaggatgaa
ggtccacaaccggatcctacacttgaacagggtgtgccaatacctgttcgattgcagggc
agcttcccgccggaattggcctccactcctctcgaggatatcgatccatactacagcaat
gtactgacattcgtagttgtaagcaagggaaaagatatttttcgcttttctgcatcaaaa
gcaatgtggctgctcgatccattcaatccgatacgtcgtgtggccatttacattttagtg
catccattattttcgttatttatcattaccaccattctcgtgaactgcatattgatgata
atgccgacaacgcccacggtcgagtccactgaggtgatattcaccggaatctacacattt
gaatcagctgttaaagtgatggcacgaggtttcattttatgcccgtttacgtatcttaga
gatgcatggaattggctggacttcgtagtaatagctttagcttatgtgaccatgggtata
gatttaggtaatctagcagccttgcgaacgtttagggtgctgcgtgcgctaaaaaccgta
gccattgttccaggcctgaaaaccatcgtcggagcggtcattgagtctgtgaaaaatctg
cgcgatgtgataatattgacaatgttctccctttcggtgttcgcactgatgggcctccaa
atctacatgggcgtgctgacacagaaatgcattaagaaattcccgcttgatggttcctgg
ggcaacttgaccgatgagaattgggactatcataatcgcaatatttccaattggtattcg
gaggacgatggcatatcgtttccgctatgtggcaatatctctggcgccggtcaatgcgat
gacgattacgtgtgtctccaggggtttggaccgaatcccaactatggttataccagtttc
gattcattcggttgggcatttctatccgccttccgtctgatgacgcaagacttttgggag
gacctgtaccagctggtgctacgcgccgctggaccctggcacatgctgttctttatagtc
atcatcttcctaggttcattctatcttgtgaatttgattttggccattgttgccatgtca
tatgacgaattgcaaaagaaggccgaagaagaggaggctgccgaagaggaggcgatacgt
gaggcagaagaggcggccgctgcgaaggccgctaagttggaggagcgagccaatgcgcag
gcgcaagccgccgcagatgcagccgccgccgaggaggcggccctgcatcccgaaatggcc
aagagtccaacgtattcgtgtatcagctatgagctattcgtgggcggtgagaagggcaac
gacgacaacaacaaggagaagatgtccatacgcagcgtcgaagtggagtcggagtcggtg
agcgttatacaaagacaaccagcacctaccacagcacaccaagctaccaaagttcgtaaa
gtgagcacgacatccttatccttacctggttcaccgtttaacatacgcaggggatcacgt
agttctcacaagtacacgatacgtaatggacgtggccgtttcggaatacctggcagtgat
cgtaagcctctcgtattgtcaacatatcaggatgcacaacaacatttgccgtacgccgac
gactccaacgcagtgacgcccatgtctgaggagaacggagccatcatagtgccggtttac
tatggaaatctaggctctagacactcgtcgtatacctcgcaccagtcccgtatctcgtat
acctcacatggcgatctgctcggcggcatggccgtcatgggcgtcagcacaatgaccaag
gaaagcaagttgcgcaatcgcaatacacgcaatcaatcagtgggcgcctccaatggcggc
accacctgcctggacaccaatcataaggtcgagcatcgcgactacgaaatcggcctggag
tgcacggacgaagcgggcaagatcaaacatcacgacaatccttttattgagcccgtccag
acacaaacggtggtcgacatgaaagatgttatggtcctgaatgatattattgagcaagcc
gcaggtcggcatagtcgcgcaagtgatcgcggtgtctccgtttactatttcccaacagag
gacgacgacgaggacgggccgacgttcaaagacaaggcgctcgaagtgatactcaaaggg
atcgatgtgttttgtgtgtgggattgctgctgggtttggttgaaatttcaggaatgggtt
tctctgatcgtcttcgatccgttcgtggagctcttcatcacgctgtgcatcgttgtgaac
acaatgttcatggccatggaccatcacgacatgaacaaggagatggagcgtgtgctcaag
agcggaaactatttcttcactgcgacttttgccattgaggccaccatgaagctgatggcc
atgagtccgaagtactatttccaggagggctggaacatcttcgatttcatcattgtcgca
ctctcactgctcgagctgggactcgagggcgttcagggcttatccgtattgcgttcgttt
cgtttgctgcgtgtattcaaattggcaaaatcttggccaacacttaatttactcatttcg
attatgggccgcaccatgggcgctttgggtaatctgacatttgtactttgcattatcatc
ttcatctttgcggtgatgggaatgcaactgttcggaaagaactatcatgatcacaaggat
cgctttccggatggtgatctgccgcgctggaacttcaccgacttcatgcacagcttcatg
atcgtgttccgagtgctatgcggagagtggatcgagtccatgtgggactgcatgtacgtg
ggcgatgtctcctgcataccattcttcttggccaccgttgtcatcggcaatcttgtggtt
cttaaccttttcttagccttgcttttgtcaaattttggctcatctagtttatcagcaccg
actgccgacaatgataccaataagatcgccgaggcctttaatcgtattggccgttttaag
agttgggttaagcgtaatattgctgattgtttcaagttaatacgtaacaaattgacaaat
caaataagtgatcaaccatcaggtgagaggatcaaccagatcagttggatttggagcgaa
gagcacggtgacaacgaattggagctgggccacgacgagatactggccgatgggctgatc
aagaagggcatcaaggagcagacacagctggaggtggccatcggcgatggcatggagttc
acaatccacggcgacatgaagaacaacaagccgaagaaatccaaatatctaaataatgca
acgatgattggcaactcaattaaccaccaagacaatagactggaacacgagctaaaccat
agaggtttgtccttacaggacgacgacactgccagcattaactcatatggtagccataag
aatcgaccattcaaggacgagagccacaagggcagcgccgaaacgatggagggcgaggag
aagcgcgacgccagcaaagaggatttaggtctcgacgaggacctggacgaggagggcgaa
tgcgaggagggccccctcgacggtgatatcataatacacgctaacgacgaggatatactt
gacgaatatccagctgattgctgccccgattcgtactataagaaatttccaatcttagcc
ggtgacgaagattcgccgttctggcaaggatggggcaatttacgactgaaaacttttcaa
ttaattgaaaataaatattttgaaacagctgttatcactatgattttaatgagtagctta
gctttggctttagaagatgttcacctgccacaacggccgatactgcaggatattttatac
tatatggacagaatatttacggttatattcttcttggagatgttaatcaagtggttggcg
ctcggcttcaaagtgtacttcacgaatgcgtggtgctggcttgatttcgttattgtcatg
gtatcgcttatcaacttcgttgcttcacttgttggagctggtggtattcaagccttcaag
actatgcgaacgttaagagcactgagaccactacgtgccatgtcccgtatgcagggcatg
cgggtcgtcgttaatgcgctggtacaagctataccgtccatcttcaatgtgctattggtg
tgtctaatattttggctaatttttgccataatgggtgtacagctttttgctggaaaatat
tttaagtgcgaagatttaaatggaacaaagctcagccacgagataataccaaatcgcaat
gcatgcgagagcgagaactacacgtgggtgaattcagcaatgaatttcgatcatgtaggt
aacgcgtatctgtgccttttccaagtggcgacctttaaaggctggatacaaataatgaac
gatgcaatcgattcacgagaggtggacaagcagccgattcgtgaaacgaacatctacatg
tatttatatttcgtgttcttcatcatatttggatcatttttcacactcaatctgttcatt
ggtgttatcattgataattttaatgagcaaaagaaaaaagcaggtggatcattagaaatg
ttcatgacagaagatcagaaaaagtactataatgctatgaaaaagatgggctctaaaaaa
ccattaaaagccattccaagaccaaggtggcgtccacaagcaatagtctttgaaatagta
accgataagaaattcgatataatcattatgttattcattggtctaaacatgttcaccatg
acactcgatcgttacgatgcgtcggacacgtacaacgcggtccttgactatctgaatgcg
atattcgtagttattttcagttccgaatgtctattaaaaatattcgctttacgatatcac
tattttattgagccatggaatttatttgatgtagtagttgtcattttatccatcttaggt
aagtaa
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integrated database retrieval system
