Drosophila arizonae: 108619452
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Entry
108619452 CDS
T05886
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108619452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108619452
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108619452
Spliceosome [BR:
daz03041
]
Complex C
Other components
Step II factors
108619452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Microtub_bd
T2SSE
Flavi_DEAD
AAA_30
AAA_16
ABC_tran
cobW
PhoH
ATPase
SRP54
Sigma54_activat
DUF3663
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
108619452
NCBI-ProteinID:
XP_017871527
LinkDB
All DBs
Position
X
AA seq
1230 aa
AA seq
DB search
MSEDDAGVHRLEGTSGQEQRGGLVLKKPKDSDNKSPSFKVPKGSVLGLDKLAAKRRAEKA
RLISFQDNEYDDGGTPSSSANASTPVSEFAFKKPDTKSFEKLSRQLREHKDETPSYTGGV
SEKARERLREHIQRDRDRHKGAVRKSTRDDSDGKRDRDRVRDRDRDRERERDRQRRGDER
RKRAREQDQELYKDGRRRDRDRDRDRDRNRDRSASVRSVNTPREPGTPGGGVSGSSWDDD
DGETSGGRKSDWDFPTPRGAGSGYGSSSSFGDWSERGSSRSRYADDTTRATPAHRYNQWA
HDRKRSGATPWAEDAELRDMWEEEQRRLDREWYNIDEGYDDENNPFGGSNADYFRRREEQ
LEQKRKKRISAQQRQNNRDNELWERNRMLTSGVVTSINVSDDFDEEALERVHLLVHHIVP
PFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSLLVRNYREQKERRKAQKKHWELGGTK
LGNIMGVQRPQDEDDAKFDRDNDTADYRKDQKFADHMRDMQDNKGKSDFSRKKTIGEQRR
FLPVFASRQELLNVIRENSVVIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAA
MSVAKRVSDEMGTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPDLDSYSAII
MDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSTKFATFFGNVPTFTIPGRTFP
VDVMFSKNACEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLSEIDNA
PELSILPIYSQLPSDLQAKIFQKSADGVRKCVVATNIAETSLTVDGIIYVIDSGYCKLKV
YNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAFRLYTQRQYKDELLPLTVPEIQRTN
LANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFP
LDPPQCQMLIVACQMECSAEVLIIVSMLSVPSIFYRPKGREEEADGVREKFQVPESDHLT
YLNVYLQWKQNSYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQKMNVKSCGTDWDIVR
KCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYM
QCATAVDGYWLAELGPMFFSVKETGRSGRDKKKLAAEHLKEMEEQMLQAQHEMEERKQLA
AQREEQLAGKQEIATPGNATPRRTPARIGL
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggatgatgcaggcgtgcaccgcttggagggcacttcaggccaggagcagcgt
ggcggcctggtgctgaaaaagcccaaagacagcgacaataagagccctagctttaaggta
ccgaaaggttcggttctgggcctagacaagctagcggccaagcgacgtgctgaaaaagca
cgcctgatctcctttcaggacaatgagtacgatgacggcggcacaccttctagctcagcc
aacgcctctacgcctgtcagcgaatttgccttcaagaaacccgacacaaagagcttcgag
aagctcagccggcagctacgtgaacacaaagacgagacgccatcatacacgggcggcgtc
tctgagaaggctagagagcggctgcgtgagcacatccagagagatcgggatcgccataaa
ggcgccgttcgtaaatcgacgcgtgatgactcagatggcaaacgggatcgcgacagagtg
agagacagagacagagatagagagcgtgagcgggacagacagcgtcgcggcgatgagagg
cgcaagcgagcacgagaacaggaccaggagctatacaaagatggtagacgaagagatagg
gaccgggatcgagatcgagatcgcaaccgagatcgctcggcgtcggtgcgcagcgtgaac
acacccagagagccgggtacgccaggtggtggtgtctccggcagctcctgggatgacgac
gatggcgagaccagcggtggacgcaaatccgactgggacttccccacaccacgcggcgct
ggctccggatacggcagtagctccagtttcggcgattggtccgagcgaggcagcagtcgc
agccggtatgccgatgacacgactcgtgccacgcccgcacatcgttacaatcagtgggcg
cacgatcgcaagcgaagcggcgcaacaccctgggccgaagatgctgagctgcgtgatatg
tgggaagaggaacagcgacgcctggaccgtgaatggtataacatagacgagggctacgac
gacgagaacaatccgttcggcggcagcaatgccgattactttcgccgtcgcgaagagcag
ctggagcagaagcgcaagaagcgcatcagcgcccagcagcggcagaacaatcgcgacaac
gagctgtgggagcgtaatcgcatgttgacctccggcgttgtcacctccatcaatgtgagc
gatgacttcgacgaggaggcgctggagcgagtccatttgctggttcatcatatagtgcca
ccgtttctggacggccgcatcgtgttcaccaagcagccggagccggtggtgcccgtcaag
gatcccacctcggacatggccctgctggcgcgcaagggcagccttctggtgcgcaactat
cgggagcaaaaggagcgccgcaaggcgcagaagaaacactgggagctgggcggcaccaag
ctgggcaacattatgggcgtgcagcggccgcaggacgaggacgatgccaaattcgatagg
gacaacgacacggccgattatcgcaaggatcagaagttcgccgatcacatgcgcgacatg
caggacaacaagggcaaaagcgacttctcgcgcaagaagacaatcggcgaacagcgtcgc
ttcctgcccgtcttcgcctcacgccaggagctgctcaatgtcatacgcgagaactcggtg
gtcatcattgtgggtgaaacaggcagcggcaagaccacacagctcacccagtatctgcac
gaggatggctacagcaaacgcggcatgatcggctgcacccagccgcgtcgtgttgccgcc
atgtcggtggccaaacgcgtctccgacgagatgggcacccaactgggcgaggatgtcggc
tatgctatacgctttgaggactgcacgtccgagcgcaccgttatcaagtacatgaccgat
ggcatcttgttgcgcgagagcctgcgcgatccggacctggacagctattcggccatcatt
atggacgaggcgcacgagcgttcgctctcaacggacgtgctcttcggattgctgcgtgag
attgtggcacggcgtcatgacctgaagctgattgtcacatccgccaccatggactcgacc
aagtttgccacgttcttcggcaatgtgccgacattcaccatacccggccggacatttccg
gtggatgtgatgttcagcaagaatgcgtgcgaggattacgtggagtcggctgtgaagcag
gcgctgcaggtgcacttgacgccgaatgagggcgacatgctgatctttatgcccggccag
gaggacatcgaggtcacgtgcgaggtgctggaggagcgcctgagcgagatcgacaatgca
cctgagctgagcatcttgcccatctactcgcagctgccgtccgatctgcaggcgaagatc
tttcagaagtccgccgatggcgtacgcaaatgcgttgtggccaccaatatagcggagaca
tcgctgacggtggacggcatcatctatgtcattgactccggctactgcaagctgaaggtc
tacaatccgcgcattggcatggacgccctgcaaatctatcccatttcgcaggcgaatgcc
aatcagcgttcgggtcgtgccggacgtacaggtcctggccaggcttttcgcttgtacaca
cagcgccagtacaaggacgagctgctgccgctgaccgtgcccgaaatccagcgcaccaat
ctggccaatacggtgctgctgctcaagtccctgggcgtggtcgatctgctgcagttccat
ttcatggatcccccgccgcaggacaacatcctgaactccctttaccagctgtggatattg
ggcgcactggatcacacaggcgccttgaccacgctgggccgacaaatggccgagttccca
ctggatccgccacagtgccagatgctcatcgtcgcctgccaaatggagtgcagcgccgag
gtgctgatcatagtatccatgctgtctgtgccatccatattctatcgccccaagggacgg
gaggaggaggcggatggtgtgcgcgagaagttccaggtgcccgaatcggatcacttgacc
tacctcaatgtctatctgcaatggaagcagaacagctatagctccacgtggtgcaacgag
cacttcatacacattaaggccatgcgcaaggtgcgcgaggtgcggcagcagctgaaggac
attatgacacagcagaagatgaacgtcaagtcatgcggcaccgattgggacattgtgcgc
aagtgcatctgctccgcctacttctatcaggcggcacggctcaagggcatcggcgagtat
gtgaatctgcgcacgggcatgccctgccatttgcatcccacatcggcactgtacgggctg
ggcaccacgcccgactatgtcgtctaccatgagctgatcatgaccgccaaggagtatatg
cagtgtgccaccgctgtcgatggctactggctggcggagctcggtccgatgttcttctcg
gtgaaggaaacgggacgcagcggacgcgacaaaaagaaactggccgccgagcatctcaag
gagatggaggagcaaatgttgcaggcccagcacgagatggaggagcgcaaacagctggcc
gcccagcgtgaggagcagctggcgggcaagcaggagatcgcaacgccaggcaatgcaacg
ccacgccgcacacccgctcgcattggcctctaa
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integrated database retrieval system
