Drosophila arizonae: 108620103
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Entry
108620103 CDS
T05886
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
daz
Drosophila arizonae
Pathway
daz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108620103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108620103
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108620103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
PRP6_TPR
Motif
Other DBs
NCBI-GeneID:
108620103
NCBI-ProteinID:
XP_017872465
UniProt:
A0ABM1PZ29
LinkDB
All DBs
Position
X
AA seq
730 aa
AA seq
DB search
MTSARDLIKIDIEWGMERLVRAQQVVELRPYDIESWSVMLREAQTRPIHEVRSLYESLVN
VFPTTARYWKLYIEMEMRSRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKAGLSTHK
EKMAQAYDFALEKIGMDLHSFSIWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTP
IVGIEQLWKDYIAFEQNINPIISEKMSLERSKDYMNARRVAKELEFHTKGLNRNLPAVPP
TLTKEETKQVELWKRFITYEKSNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQ
FLDTSARALTEKGDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKV
HTMYNKLLTLPDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALME
YYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPH
KSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCT
STELKSIGYAENVGIILNKVGSAAGNSDGDGDGETAQPLPRPDFSQMIPYKPRSCAHPGA
HPLAGGVFPQPPALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLPESAPQPNGDNDLT
PKIFDLAKSVHWIVDTSTYTGVQHSATTMQPRRRRLLPGGDDSDDELQTSVPPTNDIYRL
RQLKRFAKSN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgcaagggatttaattaaaattgatatagaatggggcatggaacgattggtg
cgcgcccagcaagtcgtcgagctgcggccatacgacatcgaatcgtggtccgtgatgctt
cgcgaggcacagactcgacccatccacgaggtacgcagcctctacgaatccctggtgaat
gtttttcccacaacagcgcgctactggaagctctatatcgaaatggagatgcgcagccga
tactatgagagagtggagaagctcttccagcgttgtctggtcaaaattctcaacattgat
ctgtggaaactctacctgacctatgtcaaagagaccaaagcgggtctcagtacccacaaa
gaaaaaatggctcaagcatatgattttgctttggaaaagattggcatggacctgcattcg
tttagcatttggcaggattatatttactttttgcgtggtgtggaagctgtgggcaactat
gcggagaatcaaaagatcacagctgttcggcgtgtctatcaaaaggcggtggtgacgccc
attgtgggcattgagcagctttggaaagattatattgcttttgagcagaacatcaatccg
ataatatcagagaaaatgagcttagaacggtccaaggactacatgaacgctcgtcgtgtg
gcgaaagagttggaatttcatacaaaagggctcaatcgcaatctgcccgctgtgccaccg
acactcaccaaagaagaaactaaacaggtggagctgtggaaacgtttcattacctatgag
aagtcaaatcctttgcgcacagaggacacggcgctcgtcactcgacgcgtgatgtttgcc
acagagcagtgtttgctggttttgacacatcatccagctgtttggcatcaggcatcgcaa
ttcctggacaccagtgcacgcgccctcaccgagaaaggcgatgtgcaagcagctaagatc
tttgcagacgaatgcgccaacatactggaacgctccatcaatggtgtgctcaatcgcaat
gctctgctctatttcgcctacgcggacttcgaggagggtcgactcaagtacgagaaggtg
cacaccatgtacaacaagctgctcaccctgccggacatcgatcccacgttggtttatgtg
cagtatatgaagttcgctcgtcgcgctgagggcatcaaatcggcgcgtagcatttttaag
aaagcccgcgaggacgttcggtcgcgctatcacatatttgtggcggccgctttaatggag
tactactgttccaaggataaggagattgcatttcgcatcttcgagctgggcctgaaacga
ttcggcggcagtcccgagtacgtgatgtgctacatcgactacctctcccacttgaacgag
gacaacaacacgcgtgtgctattcgagcgtgtcctgagctccggcggtctgtcgccccac
aagagtgtggaagtctggaatcgttttctcgaattcgagtcgaacatcggcgatctgtcc
agcattgtcaaagtggagcgaagacgcagtgcggtctttgaaaatctgaaagagtacgaa
ggcaaagaaacggcccagctggtggatcgctacaagttccttgatctatatccttgcacc
agcaccgagctcaagtccattggctatgctgagaacgtcggcatcattttgaataaggtg
ggctctgcggctgggaatagcgacggggacggggatggcgagacagcgcagcccctgcca
cgcccagatttttcccagatgataccatacaagccgcggtcgtgcgcccatcccggcgcc
catccgctggcgggcggcgtctttccacagccaccagcgctggctgcgctctgcgccacc
ctgccacccccaaatagttttcggggtccatttgtcagtgtggagctgctcttcgatatc
tttatgcgcctcaatttgccagaatcggctccacaaccgaatggcgataacgatttaacg
cccaagatcttcgatttggccaaatcggtgcactggatcgtggacaccagcacgtatacg
ggtgtgcagcacagtgcgaccacgatgcagccccgtcgacgccgcctgctgcccggcggc
gacgatagcgacgatgagctgcagacatcggtgccaccgacgaacgatatttatcgattg
cgtcaactgaagcgcttcgccaagtccaattga
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