Drosophila arizonae: 108620407
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Entry
108620407 CDS
T05886
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108620407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daz03000
]
108620407
03019 Messenger RNA biogenesis [BR:
daz03019
]
108620407
04121 Ubiquitin system [BR:
daz04121
]
108620407
Enzymes [BR:
daz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108620407
Transcription factors [BR:
daz03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108620407
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108620407
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108620407
Ubiquitin system [BR:
daz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108620407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Vasculin
RRM_Nup35
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108620407
NCBI-ProteinID:
XP_017872800
UniProt:
A0ABM1Q014
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MMNGLANSNDDTIECPLCMEPLEVDDLTFFPCTCGYQICRFCWHRIRTDENKLCPACRKE
YPENPADFKPLTQEEMIAFKSQKRQRDQQRKQKITENRKHLANVRVVQKNLVFVVGLPPR
LADADILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYVHNADALRAIQSVNNI
MIDGRLIKTSLGTTKYCSHFMKNQQCPKCDCMYLHELGDSEASFTKEEMHQGKHQEYEKR
LHDVLIATSGVNNISGIGGTGNGSSVVGSGTSKVNASGTMSSLSSSTSSVANSSTLGNAQ
QKEAWPSLSVSPINNKETLGTTSNMNGKSRKEKSRNDKGRHDKNKTKNKSHVFPNANTSN
KENFIPDTRGDSSSITITAPAEELVSTSTKIELDSVRNRQKSERNKEKGSINRASLSKEH
KEMKEEIQKTSAEVNQQLDHYDEGPDSSKEVTNRNESNIFSLSSRPASNVHRSLSSSSGN
SDDHLSESSTSEQSSPGNVKNVRCNSNATHTDMINSNIELENSDILATTKTANVHKTCEP
NTKKRDEITQSEIQDDIGTLNIGGIDFTKEDSGMLFLLTKLFILL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcttagcaaacagtaatgacgacactattgagtgcccattgtgtatggaa
ccgctagaggttgatgatttgacttttttcccatgcacgtgtggataccaaatttgtaga
ttctgttggcacagaattcgtacagacgaaaacaaactgtgtccagcatgtcgaaaagaa
tacccagaaaatcctgcggattttaaaccgcttactcaagaggaaatgattgcattcaaa
tctcaaaagcgtcaaagagatcaacaacgaaaacaaaaaataactgaaaaccggaaacac
ctagctaatgttcgtgtggttcaaaaaaatttggtatttgttgttgggttgccgcctcga
ctagctgacgctgacattttgaaaaagcacgaatattttggaaaatatggaaaaattcat
aaagttgttataaacccaagtacaacttacgctggagtacagggtccgtcagcgtcggct
tatgtcacatatgtacacaatgcagatgcattgcgagctatacaaagtgtaaacaatatt
atgatagatgggcgtctaataaaaaccagtcttggaacaacaaaatattgcagccatttt
atgaagaaccaacaatgtcccaaatgcgattgtatgtatttacatgagttgggtgactca
gaagctagttttactaaggaggaaatgcatcaaggaaaacatcaagagtatgaaaaacga
ctgcatgatgttttaattgccacttctggggtgaataatatatctggaattggagggacc
ggtaatggttcaagtgtagttggtagcggtacctcaaaagtaaacgcttcgggtacgatg
tcatcattatcatcttcgacatcgtctgttgcaaatagttcaactttaggaaatgcacag
cagaaagaagcttggccaagtttatcagtttctccaattaataacaaagaaaccttagga
acaacctctaatatgaacggaaaaagtagaaaggaaaagtcacggaacgacaaaggccgt
catgataaaaataaaactaaaaacaaaagtcatgtgttccctaatgctaatacatctaac
aaagagaactttatacctgataccaggggtgattccagctctataactataacagctcca
gctgaggaattagtcagtacttctacaaaaatagaattagattctgttaggaatcgacaa
aaatctgaacgtaacaaggaaaaaggatcaattaatcgtgcctcactttcaaaagagcat
aaagaaatgaaagaagaaatccaaaagacttcggctgaagtaaatcaacagttggatcat
tatgacgaagggccggattccagcaaagaagtaactaatcgcaatgaaagcaatatattc
tcactctcaagtcggccagcgtctaatgtacatcggtcgcttagttctagcagtggaaat
agtgatgatcacttgtctgaaagcagtacaagtgaacaaagttcacctggcaatgtaaag
aatgtgcgatgtaatagtaacgcaacccatacagatatgattaatagtaatatagaattg
gaaaattctgatattttggcaacaacgaaaacagcaaacgtacataaaacgtgcgaacca
aatactaaaaaaagagatgaaataactcaatcagaaatccaagatgatataggaacatta
aatataggaggaattgacttcacaaaggaagattcgggtatgttatttttattaactaaa
ttgtttatacttttgtag
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