Drosophila arizonae: 108620793
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Entry
108620793 CDS
T05886
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
daz
Drosophila arizonae
Pathway
daz04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108620793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108620793
03041 Spliceosome [BR:
daz03041
]
108620793
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108620793
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108620793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
108620793
NCBI-ProteinID:
XP_017873229
UniProt:
A0ABM1Q193
LinkDB
All DBs
Position
2
AA seq
342 aa
AA seq
DB search
MADKQVDSEMNGEDFTKDVTTNDVASPENGESTPAAGAANGSSENTAPASNQRDDDRKLF
VGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTDAIDQVSAAEEH
IINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGF
CFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPENQMMAMRGGARGGMRGGRGGYGR
GGYSHQWDGQGSYSGYGGYGGYGSGGFADYYAGGYYNGYDYGYDYGYGGGFDGGFGGNGY
GSGGGAGGRGAGGPRGGPKGGGGGFNGGKQRGTGRQPRHQPY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaacaagtcgatagcgaaatgaacggcgaagatttcaccaaggatgttacc
accaatgatgtggcgagccctgaaaatggtgaatcgactcccgctgccggtgctgcaaat
ggcagttctgaaaatacagcccctgcgagtaaccagcgtgatgacgacaggaaactattt
gttggtggactcagttgggaaacgactgagaaggaattgcgcgatcactttggcaagttc
ggtgagatcgagagcatcaatgtaaagacagatcctcagacgggcagatcacgcggtttc
gccttcattgtgttcacaaacacagatgcaattgatcaagtgagcgccgctgaggagcac
atcatcaacagcaagaaggtggatcccaaaaaggcgaaggcccgccatggcaagatcttt
gtcggtggactgaccacagagattagcgatgaggaaatcaaaacctacttcagtcagttt
ggcaatattgttgaggtggagatgccattcgacaagcaaaagtcacaccgtaagggcttc
tgtttcattaccttcgattcagagcaggtggttaccgatctgctgaaaacgcccaaacag
aagatctctggcaaagaagttgatgtgaagcgcgcaacaccaaaacctgagaatcaaatg
atggccatgcgtggtggagcgcgaggcggtatgcgaggtggacgaggcggatacggacgt
ggtggttattcccatcaatgggatggccagggttcgtattcgggctatggcggctatggc
ggttatggttccggtggctttgccgattactatgccggtggctactataatggatatgac
tatggttatgactacggttatggcggcggctttgatggtggctttggcggtaatggctac
gggagcggcggcggcgctggcgggcgcggtgccggaggtccgcgcggcggtcccaaaggc
ggcggcggtggcttcaacggtggcaagcagcgcggcactggacgccagccacgacaccag
ccctattaa
DBGET
integrated database retrieval system
