Drosophila arizonae: 108620809
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Entry
108620809 CDS
T05886
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108620809
03041 Spliceosome [BR:
daz03041
]
108620809
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108620809
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108620809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108620809
NCBI-ProteinID:
XP_017873254
LinkDB
All DBs
Position
2
AA seq
671 aa
AA seq
DB search
MFVIGAKKFHSMNQAVSLHYDEKENVATMMSCPLPMPLPIPIPSIHKTEFTPVHIGVKVR
IDEQLLYKFNHWVSPHVYCQMTTQLRGSDELLSQAAVMAPASDNNNQDLATKKAKLDSST
VLAGGIAKASKVIHLRNIPNESGESDVVALGIPFGRVTNVLVLKGKNQAFIEMADEISAT
SMVSCYTVNPPQMRGRMVYVQFSNHRELKTDQSHNNSSAVQSDYRIQSPAGGSPLPLCAA
ANATSNNANNSAENNCSTVAILQNNTSAVNASAGSNNTNAAGGPNTVLRVIVETLMYPVS
LDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYNGCCTLRID
NSKLTALNVKYNNDKSRDFTNPALPPGEPGVDLMPTAGGLMNTNDLLLIAARQRPSLTGD
KIVNGLGAPGVLPPFALGLGTPLSGGYSNALPNLAAFSLANSGALQTAAPAMRGYSNVLL
VSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLW
GKPIRVMASKHQAVQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSN
IPSSCTEDDIKEAFTSNNFEVKAFKFFPKDRKMALLQLSSVEEAVLALIKMHNHQLSESN
HLRVSFSKSNI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttattggtgcaaaaaagttccatagcatgaaccaagctgtaagtttgcactac
gacgagaaggaaaacgtagcgaccatgatgtcctgccccttacctatgccattaccgata
ccaataccttcaatacataaaactgaattcacaccggttcacattggagtcaaggtaagg
atcgatgaacaattactatataaatttaatcattgggtgagtccacacgtttattgccaa
atgacaacacaattacgcggaagcgacgaacttttgagtcaagctgcagtcatggcgccc
gcttccgacaataataatcaggatctggccacaaagaaggccaaactggattcgagcacc
gtgctggctggcggaattgccaaagcctcaaaggtcattcatttgcgcaacattccaaac
gaatctggtgaatcggacgtagttgcattgggcataccatttgggcgtgtgacaaatgtc
ctggtgctaaagggcaagaatcaagcatttattgaaatggccgacgaaatatccgccaca
tcgatggtctcctgttacacagtgaatccgccccagatgcgtgggcgcatggtctacgtg
cagttctccaatcatcgcgagctcaagacggaccagagtcacaacaactcgtcggcggtg
cagagtgactatcgcattcaatcgcccgccggtggctcgccgttgccgctgtgcgccgct
gccaatgcgaccagcaacaatgccaacaactcggccgagaacaactgcagcactgtggcc
atcttgcagaacaacacgagcgctgtgaatgcctcggcgggcagcaacaataccaatgct
gccggcggacccaatacggtgctgcgcgtcattgttgaaactctgatgtaccccgtttcg
ttggacatattgcatcagatattccaacgctttggcaaggtcctcaagatcgtcaccttc
accaagaacaattcattccaggctctcatccagtatccggatgcccactctgcacagcag
gccaagtcaatattggatggccagaacatctacaacggctgctgcaccttgcgcattgac
aacagcaaattgaccgccttgaatgtcaagtacaacaatgataagtcgcgcgactttacg
aatccggcgctgccaccgggcgagccgggtgtcgatctcatgcccacagccggcggctta
atgaataccaatgatctgctattgattgccgcccgtcagcggccctcattaacaggtgat
aaaatagtcaacggcctgggcgcacccggcgtgctgccgcctttcgccttgggcctaggc
actccactcagcggcggctacagcaacgccctgcccaacctggcggccttctcgctggcc
aacagcggcgccctacagaccgccgctccagctatgcgcggctactcgaatgtgctgctc
gtatcgaatttaaatgaagagatggtcacgcctgatgctctatttaccctctttggtgta
tacggcgatgtgcaacgtgtaaagatattgtacaacaaaaaggactcggcactcatacaa
atggcagagccgcagcaagcttatttggccatgtctcaccttgataaattacgtttatgg
ggcaagccgatacgtgtcatggccagcaaacatcaggccgtgcaactgcccaaggaggga
cagccggacgcggggctcacgcgtgactattcacagaatccattgcaccgtttcaagaag
cccggcagcaagaactatcagaacatctacccgccatcggcgacactgcatttaagtaac
attccctcatcctgcaccgaggatgacatcaaagaagccttcacctccaacaattttgaa
gttaaagcattcaaatttttccccaaggaccgcaaaatggcgctgctgcaactgtcgtcg
gtggaggaggccgtcctggcgctgatcaaaatgcacaatcatcagctgtccgagtcgaac
catttgcgcgtgagcttctccaagtcgaacatctag
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